DE-1

DE-1.49

Submodule 11 genes

Proteasome and lysosomal protein processing

This module contains 11 genes including LAMP1, COPS6, EIF3D, NAXE, and PSME1, with top enriched terms related to proteasome and lysosomal function. Knockdown of VEZF1 activates this module. Knockdown of SMAD4 represses this module.

Notable genes: LAMP1 COPS6 EIF3D NAXE PSME1 GRHPR NDUFA8 NDUFB6 Top TFs: VEZF1 SMAD4

TF Regulatory Network

Direction indicates the effect of TF knockdown on this submodule (↑ = KD upregulates; ↓ = KD downregulates).

Evidence: Direction: Max binding-only shown:
Perturbation + Binding
Perturbation only
Binding only
TF Dir NES #gRNA padj Bind OR

Enriched Terms

GO terms and pathway annotations enriched in this gene set (g:Profiler).


Module Genes (11)

All genes assigned to this co-expression submodule.

Gene Type Publications

Local co-expression graph for member genes built from Hotspot z-scores. Adjust the z-score threshold and repulsion sliders to explore the neighbourhood.

Gene Co-expression Network

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Low
High z