PSME1
proteasome activator subunit 1 | IFI5111, PA28alpha

The 26S proteasome is a multicatalytic proteinase complex with a highly ordered structure composed of 2 complexes, a 20S core and a 19S regulator. The 20S core is composed of 4 rings of 28 non-identical subunits; 2 rings are composed of 7 alpha subunits and 2 rings are composed of 7 beta subunits. The 19S regulator is composed of a base, which contains 6 ATPase subunits and 2 non-ATPase subunits, and a lid, which contains up to 10 non-ATPase subunits. Proteasomes are distributed throughout eukaryotic cells at a high concentration and cleave peptides in an ATP/ubiquitin-dependent process in a non-lysosomal pathway. An essential function of a modified proteasome, the immunoproteasome, is the processing of class I MHC peptides. The immunoproteasome contains an alternate regulator, referred to as the 11S regulator or PA28, that replaces the 19S regulator. Three subunits (alpha, beta and gamma) of the 11S regulator have been identified. This gene encodes the alpha subunit of the 11S regulator, one of the two 11S subunits that is induced by gamma-interferon. Three alpha and three beta subunits combine to form a heterohexameric ring. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2013]

Member of: DE-1 DE-1.49
Biological processes 19 terms
Expression (TPM)
PSME1 — as a Regulated Gene

TFs regulating PSME1 0 TFs

Transcription factors with Perturb-seq knockdown data for PSME1. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = PSME1 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to PSME1

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of PSME1, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr14:23,910,478–23,911,853 225.3 kb Distal (>10kb) Multiome 310
chr14:23,953,479–23,954,293 182.3 kb Distal (>10kb) Multiome 897
chr14:23,988,469–23,989,172 147.3 kb Distal (>10kb) Multiome 439
chr14:24,036,218–24,036,993 99.6 kb Distal (>10kb) Multiome 627
chr14:24,051,239–24,052,875 84.2 kb Distal (>10kb) Multiome HiCAR 821
chr14:24,080,914–24,082,038 54.7 kb Distal (>10kb) Multiome 706
chr14:24,093,491–24,095,115 41.9 kb Distal (>10kb) Multiome 990
chr14:24,113,681–24,115,917 21.2 kb Distal (>10kb) Multiome 1166
chr14:24,135,549–24,136,884 94 bp At TSS Multiome 778
chr14:24,140,526–24,142,331 5.5 kb Proximal (<10kb) Multiome 1034
chr14:24,146,204–24,148,108 10.6 kb Distal (>10kb) Multiome 918
chr14:24,160,877–24,161,762 25.1 kb Distal (>10kb) Multiome 970
chr14:24,171,489–24,172,698 35.7 kb Distal (>10kb) Multiome 365
chr14:24,188,229–24,189,111 52.6 kb Distal (>10kb) Multiome 1074
chr14:24,195,072–24,196,365 59.4 kb Distal (>10kb) Multiome 1059
chr14:24,212,871–24,213,884 77.2 kb Distal (>10kb) Multiome 1036
chr14:24,215,523–24,216,241 79.8 kb Distal (>10kb) Multiome 955
chr14:24,231,706–24,233,147 96.4 kb Distal (>10kb) Multiome 1027
chr14:24,241,845–24,243,572 106.4 kb Distal (>10kb) Multiome 1077
chr14:24,270,770–24,271,924 135.3 kb Distal (>10kb) Multiome 1089
chr14:24,299,120–24,300,273 163.6 kb Distal (>10kb) Multiome 892
chr14:24,315,948–24,316,753 180.2 kb Distal (>10kb) Multiome 736
chr14:24,332,251–24,333,127 196.4 kb Distal (>10kb) Multiome 740
chr14:24,365,652–24,366,243 229.6 kb Distal (>10kb) Multiome 668
chr14:24,366,594–24,369,358 231.0 kb Distal (>10kb) Multiome 921
chr14:24,388,547–24,389,510 252.8 kb Distal (>10kb) Multiome 161
chr14:24,398,424–24,399,423 262.8 kb Distal (>10kb) Multiome 354
chr14:24,429,597–24,431,070 293.9 kb Distal (>10kb) Multiome 903
chr14:24,431,554–24,432,205 295.8 kb Distal (>10kb) Multiome 604

Genome Browser

Genomic view of the PSME1 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr14:23,900,478 – 24,442,205
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq