DE-1

DE-1.30

Submodule 16 genes

Membrane trafficking and cytoskeletal organization

This 16-gene module includes ANXA5, GNAI2, MPG, RAB25, and PDLIM2, with enrichment in membrane trafficking, vesicular transport, and cytoskeletal processes. Knockdown of SOX17, EOMESODERMIN, and GATA4 activates this module. Knockdown of NANOG represses this module.


TF Regulatory Network

Direction indicates the effect of TF knockdown on this submodule (↑ = KD upregulates; ↓ = KD downregulates).

Evidence: Direction: Max binding-only shown:
Perturbation + Binding
Perturbation only
Binding only
TF Dir NES #gRNA padj Bind OR

Enriched Terms

GO terms and pathway annotations enriched in this gene set (g:Profiler).


Module Genes (16)

All genes assigned to this co-expression submodule.

Gene Type Publications

Local co-expression graph for member genes built from Hotspot z-scores. Adjust the z-score threshold and repulsion sliders to explore the neighbourhood.

Gene Co-expression Network

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Low
High z