Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

21 transcription factors

BRD4 3 datasets

ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 246 bp overlap

ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 50 bp overlap

ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 62 bp overlap

CTNNB1 1 dataset

ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 311 bp overlap

EP300 2 datasets

ChIP neural ENCSR843ZUP.EP300.neural 53 bp overlap

ChIP neural cell ENCFF442QNK 86 bp overlap

FOXA1 1 dataset

ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 269 bp overlap

FOXA2 1 dataset

ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 207 bp overlap

GATA4 1 dataset

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 309 bp overlap

GATA6 6 datasets

ChIP DE_D1 S09-DE-d1-GATA6-exp1 311 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 311 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 311 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 311 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 311 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 256 bp overlap

JUN 3 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 311 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 311 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 311 bp overlap

MAFB 1 dataset

ChIP islet ERP004003.MAFB.islet 51 bp overlap

NANOG 6 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 297 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 280 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 290 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 259 bp overlap

ChIP hESC GSE18292.NANOG.hESC 115 bp overlap

ChIP hESC GSE20650.NANOG.hESC 173 bp overlap

NKX3-1 1 dataset

ChIP islet ERP004003.NKX3-1.islet 114 bp overlap

PDX1 2 datasets

ChIP hiPSC GSE125768.PDX1.hiPSC 50 bp overlap

ChIP islet ERP001456.PDX1.islet 80 bp overlap

POU5F1 2 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 262 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 311 bp overlap

RARA 3 datasets

ChIP hiPSC_D2 GSE132532.RARA.hiPSC_D2 311 bp overlap

ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 192 bp overlap

ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 236 bp overlap

REST 1 dataset

ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 311 bp overlap

RXR 1 dataset

ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 140 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 311 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 311 bp overlap

SMAD2_3 2 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 261 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 244 bp overlap

SMARCA4 1 dataset

ChIP NSC GSE125033.SMARCA4.NSC 311 bp overlap

SMARCC1 4 datasets

ChIP DE_D1 S10-DE-d1-BAF155-exp1 311 bp overlap

ChIP DE_D1 S15-DE-d1-BAF155-exp1 270 bp overlap

ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 140 bp overlap

ChIP TTC-549_NoDox GSE71504.SMARCC1.TTC-549_NoDox 286 bp overlap

SOX2 4 datasets

ChIP HNSC GSE69479.SOX2.HNSC 242 bp overlap

ChIP NCI-H520 GSE137459.SOX2.NCI-H520 53 bp overlap

ChIP hiPSC GSE67282.SOX2.hiPSC 104 bp overlap

ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 65 bp overlap

Genome Browser