chr16 : 9,096,008 9,096,229
221 bp 23 TFs 2 linked genes
This 221 bp open chromatin element is linked to HAPSTR1 and ENSG00000263244 and is bound by 23 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
HAPSTR1 4.4 kb Proximal Proximity
ENSG00000263244 8.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:9,091,008 – 9,101,229
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
23 transcription factors
Source
Cell type
AGO2 2 datasets
ChIP HepG2 ENCFF252VFI 221 bp overlap
ChIP HepG2 ENCFF252VFI 220 bp overlap
ASH2L 1 dataset
ChIP HepG2 ENCFF207QHL 55 bp overlap
EGR1 1 dataset
ChIP HepG2 ENCFF674RQO 83 bp overlap
FOXA1 56 datasets
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 96 bp overlap
ChIP 22Rv1_TFS GSE123618.FOXA1.22Rv1_TFS 139 bp overlap
ChIP A-549 ENCSR000BPX.FOXA1.A-549 121 bp overlap
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 128 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 122 bp overlap
ChIP HepG2 ENCFF207NVJ 172 bp overlap
ChIP HepG2 ENCFF361KNY 173 bp overlap
ChIP HepG2 ENCFF740VZW 176 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 145 bp overlap
ChIP LNCaP-C4-2B_TFS GSE123618.FOXA1.LNCaP-C4-2B_TFS 167 bp overlap
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 90 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 131 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 80 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 163 bp overlap
ChIP MCF-7 GSE140185.FOXA1.MCF-7 194 bp overlap
ChIP MCF-7 GSE80808.FOXA1.MCF-7 150 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 96 bp overlap
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 99 bp overlap
ChIP MCF-7_4OH-Tam GSE75201.FOXA1.MCF-7_4OH-Tam 103 bp overlap
ChIP MCF-7_ARID1A-KO GSE140185.FOXA1.MCF-7_ARID1A-KO 123 bp overlap
ChIP MCF-7_DOX-neg GSE124654.FOXA1.MCF-7_DOX-neg 149 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 163 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 125 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 112 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 99 bp overlap
ChIP MCF-7_JC4691 GSE126004.FOXA1.MCF-7_JC4691 144 bp overlap
ChIP MCF-7_JC4692 GSE126004.FOXA1.MCF-7_JC4692 139 bp overlap
ChIP MCF-7_JC4695 GSE126004.FOXA1.MCF-7_JC4695 162 bp overlap
ChIP MCF-7_JC4697 GSE126004.FOXA1.MCF-7_JC4697 98 bp overlap
ChIP MCF-7_estrogen_ab1 GSE112969.FOXA1.MCF-7_estrogen_ab1 88 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 221 bp overlap
ChIP MCF-7_vehicle_ab1 GSE112969.FOXA1.MCF-7_vehicle_ab1 159 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 180 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 146 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 158 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 154 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 178 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 155 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 125 bp overlap
ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 191 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 153 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 110 bp overlap
ChIP T-47D_flp-ctrl GSE99479.FOXA1.T-47D_flp-ctrl 93 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 87 bp overlap
ChIP T-47D_shRNF2_24h GSE137579.FOXA1.T-47D_shRNF2_24h 89 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 68 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 115 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 172 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 114 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 221 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 98 bp overlap
ChIP breast_tumor_Female_3 GSE104399.FOXA1.breast_tumor_Female_3 216 bp overlap
ChIP breast_tumor_Male_19 GSE104399.FOXA1.breast_tumor_Male_19 218 bp overlap
ChIP liver ERP002306.FOXA1.liver 115 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 85 bp overlap
ChIP primary-breast-cancer_B4_DSG GSE114737.FOXA1.primary-breast-cancer_B4_DSG 221 bp overlap
FOXA2 11 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 179 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 221 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 51 bp overlap
ChIP DE DE-FOXA2-1 221 bp overlap
ChIP DE DE-FOXA2-2 221 bp overlap
ChIP HepG2 ENCFF533COJ 180 bp overlap
ChIP HepG2 ENCFF570ABM 53 bp overlap
ChIP HepG2 ENCFF894AYY 221 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 221 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 221 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 198 bp overlap
FOXA3 1 dataset
ChIP HepG2 ENCFF005KGL 216 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 221 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 221 bp overlap
ChIP DE DE-GATA6-2 221 bp overlap
GATAD2A 1 dataset
ChIP HepG2 ENCFF252XNH 69 bp overlap
HDAC1 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 221 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 221 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 111 bp overlap
POLR2A 1 dataset
ChIP GM12878 ENCFF412KAE 193 bp overlap
RBFOX2 5 datasets
ChIP HepG2 ENCFF554DMZ 206 bp overlap
ChIP HepG2 ENCFF939HTZ 221 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 221 bp overlap
ChIP K562 ENCFF196WTG 221 bp overlap
ChIP K562 ENCFF967GRF 221 bp overlap
SMARCA4 2 datasets
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 59 bp overlap
ChIP MCF-7 GSE140185.SMARCA4.MCF-7 136 bp overlap
SMARCC1 1 dataset
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 186 bp overlap
SUPT5H 3 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 124 bp overlap
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 159 bp overlap
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 221 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 212 bp overlap
THAP11 1 dataset
ChIP HepG2 ENCFF272SWH 201 bp overlap
ZMAT3 1 dataset
ChIP HepG2 ENCFF053XGJ 190 bp overlap