chr15 : 97,296,485 97,296,603
118 bp 12 TFs 1 linked gene
This 118 bp open chromatin element is linked to LINC02253 and is bound by 12 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC02253 577 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:97,291,485 – 97,301,603
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
12 transcription factors
Source
Cell type
BRCA1 1 dataset
ChIP K-562 ENCSR223MLH.BRCA1.K-562 118 bp overlap
BRD4 2 datasets
ChIP HCT-15 GSE73319.BRD4.HCT-15 118 bp overlap
ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 56 bp overlap
CREB1 1 dataset
ChIP MCF-7 ENCFF341ZEM 80 bp overlap
FOXA1 1 dataset
ChIP breast_tumor_Male_3 GSE104399.FOXA1.breast_tumor_Male_3 62 bp overlap
GFI1B 1 dataset
ChIP K-562_Wnt GSE117944.GFI1B.K-562_Wnt 61 bp overlap
HIC2 1 dataset
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
Hic1 1 dataset
Motif DE_12h DE_12h-Hic1_MA0739.2 8 bp overlap
KMT2A 1 dataset
ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 87 bp overlap
L3MBTL2 1 dataset
ChIP HEK293T ENCFF482NJV 118 bp overlap
MEN1 1 dataset
ChIP MCF-7_E2 GSE85317.MEN1.MCF-7_E2 118 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 105 bp overlap
STAT3 1 dataset
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 51 bp overlap