chr15 : 80,503,942 80,504,568
626 bp 13 TFs 4 linked genes
This 626 bp open chromatin element is linked to 4 target genes and is bound by 13 transcription factors.
Linked Genes
4 genes
Gene Expression Dist. to TSS Distance Link type
ARNT2 100.0 kb Distal Multiome
ARNT2-DT 100.2 kb Distal Multiome
ABHD17C 190.9 kb Distal Multiome
CEMIP 275.0 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:80,498,942 – 80,509,568
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
13 transcription factors
Source
Cell type
AR 14 datasets
ChIP DUCAP_ANDROGEN GSE70679.AR.DUCAP_ANDROGEN 129 bp overlap
ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 152 bp overlap
ChIP LNCaP_SHFOXP1_DHT GSE62492.AR.LNCaP_SHFOXP1_DHT 118 bp overlap
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 208 bp overlap
ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 192 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 383 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 307 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 294 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 330 bp overlap
ChIP VCaP_DHTTHZ1 GSE125245.AR.VCaP_DHTTHZ1 147 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 115 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 187 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 259 bp overlap
ChIP VCaP_SH2_R1881 GSE79128.AR.VCaP_SH2_R1881 235 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 297 bp overlap
FOSL1 1 dataset
ChIP BT-549 GSE112961.FOSL1.BT-549 58 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 570 bp overlap
ChIP DE DE-FOXA2-2 587 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 560 bp overlap
ChIP DE DE-GATA4-2 571 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 476 bp overlap
ChIP DE DE-GATA6-2 405 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 206 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 455 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 327 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 626 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 586 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 439 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 329 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 616 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 626 bp overlap
YY1 1 dataset
ChIP Huh-7 GSE97411.YY1.Huh-7 211 bp overlap