chr13 : 110,296,934 110,297,384
450 bp 15 TFs 2 linked genes
This 450 bp open chromatin element is linked to COL4A1 and COL4A2 and is bound by 15 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
COL4A1 9.8 kb Proximal Proximity
COL4A2 9.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:110,291,934 – 110,302,384
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
15 transcription factors
Source
Cell type
BCOR 1 dataset
ChIP VCaP_EtOH GSE122572.BCOR.VCaP_EtOH 65 bp overlap
ETS1 2 datasets
ChIP HUVEC-C_12h GSE93030.ETS1.HUVEC-C_12h 164 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.ETS1.HUVEC-C_VEGF_12h 164 bp overlap
EZH2 2 datasets
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 450 bp overlap
ChIP VCaP_ETOH GSE28950.EZH2.VCaP_ETOH 199 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 317 bp overlap
ChIP DE DE-GATA4-2 300 bp overlap
ChIP foregut GSE117136.GATA4.foregut 311 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 147 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 277 bp overlap
ChIP DE DE-GATA6-2 301 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 328 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 320 bp overlap
ChIP foregut GSE117136.GATA6.foregut 322 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 290 bp overlap
HNF1B 1 dataset
ChIP foregut GSE117136.HNF1B.foregut 239 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 110 bp overlap
NANOG 2 datasets
ChIP WA09 GSE105028.NANOG.WA09 198 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 183 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 154 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 265 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 353 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 267 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 275 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 252 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 261 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 450 bp overlap