chr13 : 95,153,091 95,153,503
412 bp 32 TFs 0 linked genes
This 412 bp open chromatin element has no linked target genes and is bound by 32 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:95,148,091 – 95,158,503
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
32 transcription factors
Source
Cell type
AR 6 datasets
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 66 bp overlap
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 193 bp overlap
ChIP LNCaP_Bag-1L_WT_DHT GSE89938.AR.LNCaP_Bag-1L_WT_DHT 264 bp overlap
ChIP LNCaP_DHT_Bag-1L-CMut GSE89938.AR.LNCaP_DHT_Bag-1L-CMut 257 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 264 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 250 bp overlap
BRCA1 1 dataset
ChIP K-562 ENCSR223MLH.BRCA1.K-562 262 bp overlap
DMRTC2 1 dataset
Motif DE_48h DE_48h-DMRTC2_MA1479.2 11 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 399 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 412 bp overlap
ChIP DE DE-FOXA2-2 412 bp overlap
FOXD2 1 dataset
Motif DE_48h DE_48h-FOXD2_MA0847.4 11 bp overlap
FOXE1 1 dataset
Motif DE_48h DE_48h-FOXE1_MA1487.3 12 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 412 bp overlap
ChIP DE DE-GATA4-2 412 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 310 bp overlap
ChIP foregut GSE117136.GATA4.foregut 412 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 412 bp overlap
GATA6 13 datasets
ChIP AGS GSE51705.GATA6.AGS 169 bp overlap
ChIP DE DE-GATA6-1 412 bp overlap
ChIP DE DE-GATA6-2 412 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 412 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 412 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 407 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 412 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 412 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 412 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 213 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 391 bp overlap
ChIP foregut GSE117136.GATA6.foregut 411 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 400 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 53 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 394 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 202 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 411 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 375 bp overlap
NFIA 1 dataset
Motif DE_48h DE_48h-NFIA_MA0670.2 6 bp overlap
NFIX 1 dataset
Motif DE_48h DE_48h-NFIX_MA0671.2 6 bp overlap
Nfe2l2 1 dataset
Motif DE_48h DE_48h-Nfe2l2_MA0150.3 11 bp overlap
POU5F1 4 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 265 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 327 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 149 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 380 bp overlap
RELA 4 datasets
ChIP HeLa-B2_P65KD_DMSO GSE24518.RELA.HeLa-B2_P65KD_DMSO 68 bp overlap
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 175 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 154 bp overlap
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 63 bp overlap
Rhox11 1 dataset
Motif DE_48h DE_48h-Rhox11_MA0629.2 9 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 403 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 226 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 355 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 332 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 191 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 225 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 224 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 306 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 370 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 262 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 213 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 250 bp overlap
ZNF317 1 dataset
Motif DE_48h DE_48h-ZNF317_MA1593.2 8 bp overlap
ZNF547 1 dataset
Motif DE_48h DE_48h-ZNF547_MA2334.1 13 bp overlap