chr13 : 36,337,249 36,337,726
477 bp 19 TFs 2 linked genes
This 477 bp open chromatin element is linked to SPART-AS1 and SPART and is bound by 19 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
SPART-AS1 8.7 kb Proximal Proximity
SPART 8.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:36,332,249 – 36,342,726
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
19 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 279 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 291 bp overlap
GATA1 1 dataset
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 55 bp overlap
GATA2 1 dataset
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 74 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 393 bp overlap
ChIP DE DE-GATA4-2 477 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 441 bp overlap
ChIP DE DE-GATA6-2 457 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 477 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 477 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 477 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 477 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 397 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 254 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 193 bp overlap
HIC1 1 dataset
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 224 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 302 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 347 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 258 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 239 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 294 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 389 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 291 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 457 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 442 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 420 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 401 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 420 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 136 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 403 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 210 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 252 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 242 bp overlap
ZNF143 2 datasets
ChIP MCF-7 GSE76454.ZNF143.MCF-7 225 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 246 bp overlap