chr1 : 216,550,453 216,550,715
262 bp 21 TFs 0 linked genes
This 262 bp open chromatin element has no linked target genes and is bound by 21 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:216,545,453 – 216,555,715
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
21 transcription factors
Source
Cell type
CRX 1 dataset
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 199 bp overlap
CTCF 1 dataset
ChIP GSC23 GSE139416.CTCF.GSC23 206 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF093OYK 244 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 56 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 160 bp overlap
ESR1 1 dataset
ChIP breast_mrnahist ERP002305.ESR1.breast_mrnahist 79 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 262 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 262 bp overlap
ChIP DE DE-FOXA2-2 262 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 262 bp overlap
GABPA 1 dataset
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 185 bp overlap
GATA3 1 dataset
ChIP BE2C GSE65664.GATA3.BE2C 152 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 262 bp overlap
ChIP DE DE-GATA4-2 262 bp overlap
ChIP foregut GSE117136.GATA4.foregut 262 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 262 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 262 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-1 262 bp overlap
ChIP DE DE-GATA6-2 262 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 257 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 210 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 220 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 251 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 207 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 262 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 262 bp overlap
ChIP foregut GSE117136.GATA6.foregut 262 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 201 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 257 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 185 bp overlap
NR3C1 1 dataset
ChIP breast_tumor_Male_1 GSE104399.NR3C1.breast_tumor_Male_1 241 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 129 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 262 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 163 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 165 bp overlap
SPI1 1 dataset
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 182 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 109 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 109 bp overlap