chr12 : 93,384,690 93,385,099
409 bp 13 TFs 2 linked genes
This 409 bp open chromatin element is linked to NUDT4 and ENSG00000257252 and is bound by 13 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
NUDT4 6.8 kb Proximal Proximity
ENSG00000257252 6.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:93,379,690 – 93,390,099
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
13 transcription factors
Source
Cell type
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 257 bp overlap
FOXA1 2 datasets
ChIP LAPC-4_CST_DHT GSE123618.FOXA1.LAPC-4_CST_DHT 236 bp overlap
ChIP prostate_2078_T GSE130408.FOXA1.prostate_2078_T 129 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 205 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 114 bp overlap
MED1 1 dataset
ChIP cardiomyocyte_5 GSE85628.MED1.cardiomyocyte_5 409 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 200 bp overlap
NEUROD1 1 dataset
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 141 bp overlap
NFATC1 1 dataset
ChIP GM12878 ENCFF023CAZ 66 bp overlap
PAX5 1 dataset
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 124 bp overlap
SMAD2 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 275 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 256 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 409 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 409 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 409 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 378 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 400 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 288 bp overlap
SMAD3 1 dataset
ChIP Hep-G2 ENCSR005GZH.SMAD3.Hep-G2 101 bp overlap