chr12 : 79,936,342 79,936,554
212 bp 25 TFs 2 linked genes
This 212 bp open chromatin element is linked to PPP1R12A and PPP1R12A-AS1 and is bound by 25 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
PPP1R12A 1.2 kb Proximal Proximity
PPP1R12A-AS1 1.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:79,931,342 – 79,941,554
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
25 transcription factors
Source
Cell type
ASCL1 2 datasets
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 109 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 166 bp overlap
CTCF 2 datasets
ChIP gastroesophageal sphincter ENCFF569YIT 126 bp overlap
ChIP gastroesophageal-sphincter ENCSR146BGM.CTCF.gastroesophageal-sphincter 173 bp overlap
ELF4 1 dataset
ChIP HepG2 ENCFF752OAT 77 bp overlap
FOXA1 1 dataset
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 203 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 212 bp overlap
ChIP DE DE-FOXA2-2 212 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 148 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 212 bp overlap
ChIP DE DE-GATA4-2 212 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 212 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 212 bp overlap
ChIP DE DE-GATA6-2 212 bp overlap
MED1 2 datasets
ChIP G296S_4 GSE85628.MED1.G296S_4 211 bp overlap
ChIP SGBS GSE64233.MED1.SGBS 107 bp overlap
POLR2A 3 datasets
ChIP GM12878 ENCFF263VRI 212 bp overlap
ChIP gastroesophageal sphincter ENCFF238INU 212 bp overlap
ChIP gastroesophageal sphincter ENCFF238INU 69 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 212 bp overlap
RBFOX2 2 datasets
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 136 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 136 bp overlap
SNAI2 2 datasets
ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 174 bp overlap
ChIP keratinocyte_SHCTR GSE55421.SNAI2.keratinocyte_SHCTR 152 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 201 bp overlap
SUPT5H 1 dataset
ChIP U2OS_siCtrl GSE115365.SUPT5H.U2OS_siCtrl 104 bp overlap
TFDP1 1 dataset
ChIP K562 ENCFF794ZXJ 137 bp overlap
ZBTB12 2 datasets
ChIP HEK293 ENCFF963HPT 136 bp overlap
ChIP HEK293 ENCSR543KOA.ZBTB12.HEK293 212 bp overlap
ZBTB6 3 datasets
ChIP HEK293 ENCFF881ECZ 212 bp overlap
ChIP HEK293 ENCSR619OUC.ZBTB6.HEK293 212 bp overlap
ChIP HEK293 GSE76494.ZBTB6.HEK293 197 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 132 bp overlap
ZNF3 1 dataset
ChIP Hep-G2 ENCSR182QWU.ZNF3.Hep-G2 79 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 127 bp overlap