chr12 : 50,398,996 50,399,281
285 bp 10 TFs 2 linked genes
This 285 bp open chromatin element is linked to LARP4 and FAM186A and is bound by 10 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
LARP4 1.6 kb Proximal Proximity
FAM186A 2.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:50,393,996 – 50,404,281
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
10 transcription factors
Source
Cell type
BCOR 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 160 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 285 bp overlap
ESR1 1 dataset
ChIP breast_mrnahist ERP002305.ESR1.breast_mrnahist 166 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 285 bp overlap
ChIP DE DE-FOXA2-2 285 bp overlap
GATA4 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 184 bp overlap
ChIP DE DE-GATA4-1 285 bp overlap
ChIP DE DE-GATA4-2 285 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 285 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 285 bp overlap
ChIP DE DE-GATA6-2 285 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 285 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 254 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 285 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 285 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 254 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 285 bp overlap
GRHL2 1 dataset
ChIP LNCaP GSE80256.GRHL2.LNCaP 182 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 285 bp overlap
TAF1 1 dataset
ChIP GM12878 ENCSR000BGS.TAF1.GM12878 181 bp overlap