chr12 : 49,986,571 49,986,973
402 bp 18 TFs 0 linked genes
This 402 bp open chromatin element has no linked target genes and is bound by 18 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:49,981,571 – 49,991,973
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
18 transcription factors
Source
Cell type
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 189 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 205 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 345 bp overlap
ChIP DE DE-FOXA2-2 402 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 402 bp overlap
ChIP DE DE-GATA4-2 402 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 402 bp overlap
ChIP DE DE-GATA6-2 402 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 279 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 402 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 259 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 367 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 196 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94822.MYCN.Kelly 129 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 115 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 169 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 286 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 260 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 349 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 262 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 402 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 232 bp overlap
WT1 1 dataset
ChIP HEK293 ENCFF906HIR 375 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 332 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 216 bp overlap
ZNF143 1 dataset
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 168 bp overlap