chr11 : 99,814,810 – 99,815,029
219 bp 17 TFs 0 linked genes
This 219 bp open chromatin element has no linked target genes and is bound by 17 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:99,809,810 – 99,820,029
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
17 transcription factors
Source
Cell type
Ahr::Arnt 1 dataset
Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap
CTCF 115 datasets
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 219 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 219 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 214 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 184 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 219 bp overlap
ChIP A673 ENCFF123WOM 120 bp overlap
ChIP BE2C ENCFF757SRF 219 bp overlap
ChIP C4-2B ENCFF821XVN 219 bp overlap
ChIP C4-2B ENCFF821XVN 219 bp overlap
ChIP Caco-2 ENCFF753NZV 219 bp overlap
ChIP Caco-2 ENCFF934QYS 209 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 188 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 219 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 219 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 183 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 216 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 219 bp overlap
ChIP GM12864 ENCFF357DQE 219 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 145 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 130 bp overlap
ChIP GM12872 ENCFF697BYI 219 bp overlap
ChIP GM12873 ENCFF711LOS 219 bp overlap
ChIP GM12878 ENCFF511URZ 201 bp overlap
ChIP GM12878 GSE76922.CTCF.GM12878 154 bp overlap
ChIP GM23338 ENCFF531QOI 172 bp overlap
ChIP GM23338 ENCFF772DML 159 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 177 bp overlap
ChIP H1 ENCFF764RHO 219 bp overlap
ChIP H9 ENCFF152GTF 219 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 177 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 206 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 167 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 219 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 208 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 218 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 169 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 216 bp overlap
ChIP HEC-1-B_ac1-CBS-deletion GSE140868.CTCF.HEC-1-B_ac1-CBS-deletion 58 bp overlap
ChIP HEK293 ENCFF498RMM 219 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 176 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 184 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 164 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 172 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 170 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 216 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 176 bp overlap
ChIP HeLa-S3 ENCFF255ASZ 219 bp overlap
ChIP HeLa-S3 ENCFF565UFR 161 bp overlap
ChIP HeLa-S3 ENCFF626XQK 213 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 219 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 115 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 196 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 174 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 175 bp overlap
ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 121 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 131 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 129 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 119 bp overlap
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 101 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 111 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 179 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 175 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 219 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 219 bp overlap
ChIP MCF-10AT1 GSE98551.CTCF.MCF-10AT1 219 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 159 bp overlap
ChIP MM.1S ENCFF869JMQ 219 bp overlap
ChIP MM1-S ENCSR402IDP.CTCF.MM1-S 175 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 133 bp overlap
ChIP NCI-H929 ENCFF305JAB 219 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 219 bp overlap
ChIP OCI-LY1 ENCFF455ESK 219 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 219 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 174 bp overlap
ChIP PC-3 ENCFF487TUI 219 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 219 bp overlap
ChIP PC-9 ENCFF539ULB 219 bp overlap
ChIP Panc1 ENCFF056JQX 219 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 162 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 219 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 219 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 207 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 214 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 168 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 219 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 202 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 199 bp overlap
ChIP VCaP ENCFF858YQT 219 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 219 bp overlap
ChIP VCaP_ETOH GSE84432.CTCF.VCaP_ETOH 146 bp overlap
ChIP VCaP_R1881 GSE84432.CTCF.VCaP_R1881 146 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 117 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 207 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 219 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 219 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 118 bp overlap
ChIP endodermal cell ENCFF471YCZ 219 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 174 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 219 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 134 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 199 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 151 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 189 bp overlap
ChIP hepatocyte ENCFF263BLJ 219 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 136 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 193 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 100 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 109 bp overlap
ChIP kidney epithelial cell ENCFF173LWY 219 bp overlap
ChIP neural progenitor cell ENCFF420RBO 219 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 202 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 137 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 219 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF896HSY 196 bp overlap
IRF4 2 datasets
ChIP NCI-H929 GSE142493.IRF4.NCI-H929 108 bp overlap
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 85 bp overlap
NEUROD1 1 dataset
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 69 bp overlap
Nr1h3::Rxra 1 dataset
Motif DE_12h DE_12h-Nr1h3Rxra_MA0494.2 16 bp overlap
PPARA::RXRA 1 dataset
Motif DE_12h DE_12h-PPARARXRA_MA1148.2 17 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Plagl1 1 dataset
Motif DE_12h DE_12h-Plagl1_MA1615.2 8 bp overlap
RAD21 3 datasets
ChIP H1 ENCFF698EWO 202 bp overlap
ChIP H1 ENCFF967OJF 213 bp overlap
ChIP Ishikawa ENCFF570JVV 205 bp overlap
SMC3 1 dataset
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 180 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
STAG1 2 datasets
ChIP HeLa GSE126990.STAG1.HeLa 211 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 211 bp overlap
TFAP2A 1 dataset
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
TFAP2C 1 dataset
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 109 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
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