chr11 : 93,815,049 93,815,512
463 bp 16 TFs 1 linked gene
This 463 bp open chromatin element is linked to VSTM5 and is bound by 16 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
VSTM5 5.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:93,810,049 – 93,820,512
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
AR 2 datasets
ChIP DU145_FOXA1_ARQ6540X GSE47987.AR.DU145_FOXA1_ARQ6540X 91 bp overlap
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 126 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 448 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 463 bp overlap
ChIP DE DE-FOXA2-2 463 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 463 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 463 bp overlap
ChIP DE DE-GATA4-2 463 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 463 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 463 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 463 bp overlap
ChIP DE DE-GATA6-2 463 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 437 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 297 bp overlap
ChIP foregut GSE117136.GATA6.foregut 378 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 288 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 463 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 110 bp overlap
NR3C1 1 dataset
ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 150 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 92 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 383 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 406 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 276 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 305 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 263 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 445 bp overlap
SUPT5H 1 dataset
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 67 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 261 bp overlap
TFAP2C 1 dataset
ChIP WA09 GSE105081.TFAP2C.WA09 141 bp overlap