Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

14 transcription factors

CTCF 30 datasets

ChIP A-673 ENCSR611JJS.CTCF.A-673 160 bp overlap

ChIP B-cell ENCSR000AUV.CTCF.B-cell 102 bp overlap

ChIP C4-2B ENCFF821XVN 177 bp overlap

ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 161 bp overlap

ChIP GM04604 GSE148179.CTCF.GM04604 50 bp overlap

ChIP GM04648 GSE148179.CTCF.GM04648 147 bp overlap

ChIP GM06077 GSE148179.CTCF.GM06077 173 bp overlap

ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 200 bp overlap

ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 52 bp overlap

ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 103 bp overlap

ChIP LNCaP_hydroxy_10nM_4h ENCSR673WZL.CTCF.LNCaP_hydroxy_10nM_4h 58 bp overlap

ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 106 bp overlap

ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 155 bp overlap

ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 203 bp overlap

ChIP PC-3 ENCSR359LOD.CTCF.PC-3 107 bp overlap

ChIP Panc1 ENCFF056JQX 154 bp overlap

ChIP RWPE2 ENCFF911IEE 65 bp overlap

ChIP T-cell GSE115893.CTCF.T-cell 104 bp overlap

ChIP chondrocyte ENCFF134ORZ 117 bp overlap

ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 57 bp overlap

ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 150 bp overlap

ChIP epithelial cell of prostate ENCFF086GTI 87 bp overlap

ChIP hESC_D5 GSE116862.CTCF.hESC_D5 163 bp overlap

ChIP hESC_D7 GSE116862.CTCF.hESC_D7 176 bp overlap

ChIP lymphoblast_mut GSE155324.CTCF.lymphoblast_mut 96 bp overlap

ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 79 bp overlap

ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 108 bp overlap

ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 122 bp overlap

ChIP retina_AB1-FW14 GSE86981.CTCF.retina_AB1-FW14 68 bp overlap

ChIP spleen ENCSR225YGX.CTCF.spleen 198 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 170 bp overlap

ERG 1 dataset

ChIP aortic-endothelial-cell_D28 GSE139377.ERG.aortic-endothelial-cell_D28 89 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 336 bp overlap

ChIP DE DE-FOXA2-2 336 bp overlap

GATA1 4 datasets

ChIP K-562 GSE107726.GATA1.K-562 146 bp overlap

ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 136 bp overlap

ChIP erythroblast ENCFF867JAR 328 bp overlap

ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 336 bp overlap

GATA3 1 dataset

ChIP Jurkat GSE76181.GATA3.Jurkat 116 bp overlap

GATA4 4 datasets

ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 197 bp overlap

ChIP DE DE-GATA4-1 336 bp overlap

ChIP DE DE-GATA4-2 336 bp overlap

ChIP Hep-G2 GSE135714.GATA4.Hep-G2 193 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 336 bp overlap

ChIP DE DE-GATA6-2 336 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 336 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 336 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 336 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 336 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 336 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 336 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 260 bp overlap

MRTFB 1 dataset

ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 138 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 336 bp overlap

SMAD2_3 1 dataset

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 230 bp overlap

SPI1 1 dataset

ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 175 bp overlap

T 1 dataset

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 142 bp overlap

ZBTB7A 1 dataset

ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 215 bp overlap

Gene	Expression	Dist. to TSS	Distance	Link type
CCDC90B-AS1		6.3 kb	Proximal	Proximity
CCDC90B		6.4 kb	Proximal	Proximity

Genome Browser