chr11 : 8,015,683 8,015,934
251 bp 10 TFs 2 linked genes
This 251 bp open chromatin element is linked to CASC23 and TUB and is bound by 10 transcription factors.
Linked Genes
2 genes
Distance
Gene Expression Dist. to TSS Distance Link type
CASC23 585 bp At TSS Proximity
TUB 3.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:8,010,683 – 8,020,934
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
10 transcription factors
Source
Cell type
BRD2 2 datasets
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD2.MDA-MB-231_JQ1_MGSK2801 82 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_JQ1_MGSK2801_rDNA 82 bp overlap
BRD4 2 datasets
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801 90 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801_rDNA 90 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 116 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF451CNG 64 bp overlap
ChIP fibroblast_senescent GSE106146.EP300.fibroblast_senescent 59 bp overlap
RXRA 1 dataset
ChIP SK-N-SH ENCFF893DLM 59 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 251 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 251 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 251 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 251 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 251 bp overlap
SMARCA4 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 128 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 251 bp overlap
SOX11 1 dataset
ChIP GRANT-A519 GSE52146.SOX11.GRANT-A519 90 bp overlap
TEAD4 2 datasets
ChIP MDA-MB-231 GSE66081.TEAD4.MDA-MB-231 105 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 135 bp overlap