chr1 : 194,935,980 – 194,936,155
175 bp 27 TFs 0 linked genes
This 175 bp open chromatin element has no linked target genes and is bound by 27 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:194,930,980 – 194,941,155
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
27 transcription factors
Source
Cell type
ASCL1 2 datasets
Motif DE_12h DE_12h-ASCL1_MA1100.3 8 bp overlap
Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap
Ascl2 1 dataset
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
BHLHE22 1 dataset
Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap
CTCF 184 datasets
ChIP 22Rv1 ENCFF466OXN 175 bp overlap
ChIP 22Rv1 ENCFF466OXN 124 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 175 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 175 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 175 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 175 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 175 bp overlap
ChIP BC-3 GSE135740.CTCF.BC-3 175 bp overlap
ChIP BE2C ENCFF757SRF 175 bp overlap
ChIP C4-2B ENCFF821XVN 175 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
ChIP DOHH2 ENCFF637WNW 175 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 175 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 175 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 175 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 175 bp overlap
ChIP GM06990 ENCFF471OQT 175 bp overlap
ChIP GM06990 ENCSR000DQW.CTCF.GM06990 175 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 175 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 175 bp overlap
ChIP GM10248 ENCFF083HVS 154 bp overlap
ChIP GM12864 ENCFF357DQE 175 bp overlap
ChIP GM12864 ENCSR000DRB.CTCF.GM12864 175 bp overlap
ChIP GM12865 ENCFF067GFI 175 bp overlap
ChIP GM12865 ENCSR000DRE.CTCF.GM12865 159 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 175 bp overlap
ChIP GM12867 ENCSR000DRH.CTCF.GM12867 175 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 170 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 175 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 88 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 175 bp overlap
ChIP GM12872 ENCFF697BYI 175 bp overlap
ChIP GM12872 ENCSR000DRN.CTCF.GM12872 175 bp overlap
ChIP GM12873 ENCFF711LOS 175 bp overlap
ChIP GM12873 ENCSR000DRP.CTCF.GM12873 175 bp overlap
ChIP GM12874 ENCFF942MTD 175 bp overlap
ChIP GM12874 ENCSR000DRR.CTCF.GM12874 175 bp overlap
ChIP GM12875 ENCFF081UCQ 175 bp overlap
ChIP GM12875 ENCSR000DRU.CTCF.GM12875 164 bp overlap
ChIP GM12878 ENCFF217EAX 175 bp overlap
ChIP GM12878 ENCFF485TGR 175 bp overlap
ChIP GM12878 ENCFF511URZ 175 bp overlap
ChIP GM12878 ENCFF635MMB 175 bp overlap
ChIP GM12878 GSE76922.CTCF.GM12878 175 bp overlap
ChIP GM12878 ENCSR000DKV.CTCF.GM12878 112 bp overlap
ChIP GM12878 ENCSR000DRZ.CTCF.GM12878 100 bp overlap
ChIP GM13977 ENCFF528ESQ 163 bp overlap
ChIP GM13977 ENCSR000DLB.CTCF.GM13977 104 bp overlap
ChIP GM17942 GSE76922.CTCF.GM17942 175 bp overlap
ChIP GM23338 ENCFF531QOI 175 bp overlap
ChIP GM23338 ENCFF772DML 148 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H9 ENCFF152GTF 175 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 175 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 175 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 175 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 175 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 175 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 147 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 175 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 175 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 175 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 175 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 175 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 132 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 175 bp overlap
ChIP HCT116 ENCFF003KHP 175 bp overlap
ChIP HCT116 ENCFF003KHP 157 bp overlap
ChIP HCT116 ENCFF209YMI 175 bp overlap
ChIP HEK293 ENCFF498RMM 175 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 169 bp overlap
ChIP HFF-Myc ENCFF680WYR 175 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 146 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 175 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 159 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 79 bp overlap
ChIP ID00016 GSE76922.CTCF.ID00016 175 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 124 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 175 bp overlap
ChIP K-562 GSE70482.CTCF.K-562 175 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 105 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 170 bp overlap
ChIP K-562_12040 GSE131349.CTCF.K-562_12040 141 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 172 bp overlap
ChIP K-562_13189 GSE131349.CTCF.K-562_13189 142 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 170 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 157 bp overlap
ChIP K-562_15173 GSE131349.CTCF.K-562_15173 163 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 166 bp overlap
ChIP K-562_15923 GSE131349.CTCF.K-562_15923 102 bp overlap
ChIP K-562_5635 GSE131349.CTCF.K-562_5635 157 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 170 bp overlap
ChIP K-562_8004 GSE131349.CTCF.K-562_8004 143 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 154 bp overlap
ChIP K-562_CRISPRa_N4293 GSE131349.CTCF.K-562_CRISPRa_N4293 148 bp overlap
ChIP K-562_CRISPRi_N4293 GSE131349.CTCF.K-562_CRISPRi_N4293 140 bp overlap
ChIP K-562_CRISPRk_N4293 GSE131349.CTCF.K-562_CRISPRk_N4293 144 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 175 bp overlap
ChIP K-562_RF2-mutation GSE140868.CTCF.K-562_RF2-mutation 175 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 175 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.CTCF.K-562_dCas9-KRAB 175 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.CTCF.K-562_enCRISPRi-KL 175 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 175 bp overlap
ChIP K-562_sgGal4 GSE132212.CTCF.K-562_sgGal4 175 bp overlap
ChIP K562 ENCFF082GOI 174 bp overlap
ChIP K562 ENCFF430KTH 175 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 175 bp overlap
ChIP KMS-11 ENCFF853JKX 175 bp overlap
ChIP KMS-11_NSD2-High GSE131651.CTCF.KMS-11_NSD2-High 99 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 173 bp overlap
ChIP LNCAP ENCFF223HIG 175 bp overlap
ChIP Loucy ENCFF359TVQ 175 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 175 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 175 bp overlap
ChIP MCF-7 ENCFF210JUZ 175 bp overlap
ChIP MCF-7 ENCFF414SZG 175 bp overlap
ChIP MCF-7 ENCFF844STM 175 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 175 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 175 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 140 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 116 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 175 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 175 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 175 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 175 bp overlap
ChIP NB4 ENCFF155DNY 175 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 175 bp overlap
ChIP NCI-H929 ENCFF305JAB 175 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 175 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 175 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 160 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 175 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 175 bp overlap
ChIP Panc1 ENCFF056JQX 175 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 137 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 162 bp overlap
ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 159 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 175 bp overlap
ChIP SK-N-SH ENCFF575DMG 175 bp overlap
ChIP SK-N-SH ENCFF575DMG 101 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 175 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 96 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 175 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 149 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 149 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 173 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 103 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 175 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 148 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 156 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 175 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 175 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 175 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 153 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-120m-Flavo-000m 145 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 175 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 175 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 175 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-0h 175 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-4h 175 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-4h 145 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-4h 175 bp overlap
ChIP THP-1_siWAPL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-eGFP-Pam3csk-4h 160 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 175 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 175 bp overlap
ChIP delta-47 GSE70764.CTCF.delta-47 175 bp overlap
ChIP endodermal cell ENCFF471YCZ 175 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 117 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 127 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 168 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 175 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 175 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 171 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 144 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 113 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 175 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 175 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 163 bp overlap
ChIP neural progenitor cell ENCFF420RBO 109 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 175 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 147 bp overlap
ChIP plasmablast GSE142493.CTCF.plasmablast 122 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 175 bp overlap
CTCFL 1 dataset
ChIP Kelly_shLUC-res GSE115248.CTCFL.Kelly_shLUC-res 173 bp overlap
Hand1 1 dataset
Motif DE_12h DE_12h-Hand1_MA2123.1 9 bp overlap
MYOG 1 dataset
Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap
NFATC3 1 dataset
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
NHLH1 1 dataset
Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap
Neurod2 1 dataset
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
Nfatc1 1 dataset
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
Nr2F6 1 dataset
Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
PLAG1 1 dataset
Motif DE_12h DE_12h-PLAG1_MA0163.1 14 bp overlap
RAD21 6 datasets
ChIP GM12878 ENCFF101UQZ 169 bp overlap
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 173 bp overlap
ChIP H1 ENCFF698EWO 175 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 148 bp overlap
ChIP K562 ENCFF169SQI 171 bp overlap
ChIP K562 ENCFF634XYR 175 bp overlap
SMAD2 1 dataset
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 78 bp overlap
THAP1 1 dataset
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 128 bp overlap
ZKSCAN1 1 dataset
Motif DE_12h DE_12h-ZKSCAN1_MA1585.2 9 bp overlap
ZNF257 1 dataset
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
ZNF320 1 dataset
Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap
ZNF417 1 dataset
Motif DE_12h DE_12h-ZNF417_MA1727.2 7 bp overlap
ZNF549 1 dataset
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
Zfp961 1 dataset
Motif DE_12h DE_12h-Zfp961_MA2126.1 8 bp overlap
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