chr1 : 20,431,159 20,431,337
178 bp 14 TFs 1 linked gene
This 178 bp open chromatin element is linked to LINC01141 and is bound by 14 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC01141 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:20,426,159 – 20,436,337
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
14 transcription factors
Source
Cell type
AR 30 datasets
ChIP LNCaP ERP003503.AR.LNCaP 76 bp overlap
ChIP LNCaP ERP001226.AR.LNCaP 67 bp overlap
ChIP LNCaP GSE110655.AR.LNCaP 59 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-075 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-075 66 bp overlap
ChIP LNCaP_Bag-1L_WT_DHT GSE89938.AR.LNCaP_Bag-1L_WT_DHT 55 bp overlap
ChIP LNCaP_DHT GSE43720.AR.LNCaP_DHT 66 bp overlap
ChIP LNCaP_DHT GSE125245.AR.LNCaP_DHT 62 bp overlap
ChIP LNCaP_DSG GSE114737.AR.LNCaP_DSG 97 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 100 bp overlap
ChIP LNCaP_R1881 GSE62492.AR.LNCaP_R1881 62 bp overlap
ChIP LNCaP_R1881_HOTAIR GSE61268.AR.LNCaP_R1881_HOTAIR 64 bp overlap
ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 60 bp overlap
ChIP LNCaP_Talen_DHT GSE89938.AR.LNCaP_Talen_DHT 107 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 114 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 53 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 110 bp overlap
ChIP LTAD_siControl GSE94577.AR.LTAD_siControl 67 bp overlap
ChIP VCaP GSE148358.AR.VCaP 59 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 112 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 128 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 178 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 52 bp overlap
ChIP VCaP_DHTTHZ1 GSE125245.AR.VCaP_DHTTHZ1 178 bp overlap
ChIP VCaP_Darolutamide GSE148358.AR.VCaP_Darolutamide 99 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 67 bp overlap
ChIP VCaP_R1881_1C30 GSE32892.AR.VCaP_R1881_1C30 50 bp overlap
ChIP prostate-cancer_C4-2-CON GSE136128.AR.prostate-cancer_C4-2-CON 53 bp overlap
ChIP prostate-cancer_PDX_189-4 GSE130408.AR.prostate-cancer_PDX_189-4 55 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 67 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.AR.prostate-cancer_PDX_92 99 bp overlap
BRD4 2 datasets
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 178 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 170 bp overlap
CTCF 7 datasets
ChIP CD14-positive monocyte ENCFF087XLR 178 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 131 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 171 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 105 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 173 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 178 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 110 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 138 bp overlap
EZH2 1 dataset
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 178 bp overlap
FOXA1 1 dataset
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 77 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 178 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 178 bp overlap
RAD21 2 datasets
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 102 bp overlap
ChIP HEK293_siYAP GSE130135.RAD21.HEK293_siYAP 178 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 141 bp overlap
RFX1 2 datasets
ChIP K562 ENCFF421AVO 168 bp overlap
ChIP MCF-7 ENCFF973QAD 146 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 165 bp overlap