chr10 : 11,739,170 11,739,673
503 bp 20 TFs 1 linked gene
This 503 bp open chromatin element is linked to ECHDC3 and is bound by 20 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ECHDC3 2.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:11,734,170 – 11,744,673
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
CEBPB 2 datasets
ChIP K-562 ENCSR000EHE.CEBPB.K-562 82 bp overlap
ChIP K562 ENCFF189VBN 119 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 343 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF093OYK 244 bp overlap
ChIP BLaER1 ENCFF844FIP 296 bp overlap
DNMT3B 1 dataset
ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 227 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 352 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 334 bp overlap
ChIP DE DE-FOXA2-2 366 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 503 bp overlap
ChIP DE DE-GATA4-2 503 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 503 bp overlap
ChIP DE DE-GATA6-2 503 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 483 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 400 bp overlap
MYOD1 1 dataset
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 121 bp overlap
NR2F2 1 dataset
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 63 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 119 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 119 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 205 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 500 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 503 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 503 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 169 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 280 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 436 bp overlap
ZNF436 1 dataset
ChIP HEK293 GSE76494.ZNF436.HEK293 171 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 210 bp overlap