chr9 : 104,934,663 104,934,869
206 bp 13 TFs 2 linked genes
This 206 bp open chromatin element is linked to ABCA1 and ENSG00000226334 and is bound by 13 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ABCA1 6.5 kb Proximal Proximity
ENSG00000226334 7.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:104,929,663 – 104,939,869
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
13 transcription factors
Source
Cell type
ARID1A 2 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 206 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.ARID1A.MCF-7_Fulvestrant 112 bp overlap
ESR1 7 datasets
ChIP MCF-7_SHFOXA1_E2 ERP000380.ESR1.MCF-7_SHFOXA1_E2 54 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 51 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 113 bp overlap
ChIP MCF-7_jc5852 GSE126004.ESR1.MCF-7_jc5852 67 bp overlap
ChIP MCF-7_jc5854 GSE126004.ESR1.MCF-7_jc5854 73 bp overlap
ChIP MCF-7_jc5855 GSE126004.ESR1.MCF-7_jc5855 67 bp overlap
ChIP MCF-7_jc5856 GSE126004.ESR1.MCF-7_jc5856 91 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 206 bp overlap
ChIP DE DE-FOXA2-2 206 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 206 bp overlap
ChIP DE DE-GATA4-2 206 bp overlap
ChIP foregut GSE117136.GATA4.foregut 171 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 206 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 206 bp overlap
ChIP DE DE-GATA6-2 206 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 164 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 206 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 206 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 206 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 206 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 186 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 206 bp overlap
ChIP foregut GSE117136.GATA6.foregut 206 bp overlap
JUN 1 dataset
ChIP ESC S34-ESC-d0-JUN-exp2 73 bp overlap
MYB 1 dataset
ChIP Loucy GSE94000.MYB.Loucy 206 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 206 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 206 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 188 bp overlap
SPI1 1 dataset
ChIP HL-60 ENCFF645GBT 104 bp overlap
STAT3 5 datasets
ChIP MCF-7_jc5834 GSE126004.STAT3.MCF-7_jc5834 105 bp overlap
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 206 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 149 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 155 bp overlap
ChIP MCF-7_jc5848 GSE126004.STAT3.MCF-7_jc5848 74 bp overlap
ZNF143 1 dataset
ChIP MCF-7 GSE76454.ZNF143.MCF-7 55 bp overlap