chr9 : 86,118,248 86,119,118
870 bp 10 TFs 5 linked genes
This 870 bp open chromatin element is linked to 5 target genes and is bound by 10 transcription factors.
Linked Genes
5 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
ENSG00000287333 8.4 kb Proximal Proximity
GOLM1 18.4 kb Distal Multiome
ISCA1 164.0 kb Distal Multiome
NAA35 177.4 kb Distal Multiome
TUT7 235.9 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:86,113,248 – 86,124,118
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
10 transcription factors
Source
Cell type
FOXA2 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 293 bp overlap
ChIP BJ1-hTERT_GATA4 GSE90454.FOXA2.BJ1-hTERT_GATA4 182 bp overlap
ChIP DE DE-FOXA2-1 618 bp overlap
ChIP DE DE-FOXA2-2 542 bp overlap
GATA2 1 dataset
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 79 bp overlap
GATA4 6 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 338 bp overlap
ChIP DE DE-GATA4-1 867 bp overlap
ChIP DE DE-GATA4-2 850 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 382 bp overlap
ChIP foregut GSE117136.GATA4.foregut 445 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 399 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 627 bp overlap
ChIP DE DE-GATA6-2 832 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 304 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 832 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 333 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 155 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 454 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 336 bp overlap
HNRNPK 2 datasets
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 199 bp overlap
ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 219 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 487 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 265 bp overlap
ZNF300 1 dataset
ChIP HEK293T GSE78099.ZNF300.HEK293T 296 bp overlap