chr1 : 18,099,020 – 18,099,373
353 bp 14 TFs 1 linked gene
This 353 bp open chromatin element is linked to IGSF21 and is bound by 14 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
IGSF21 8.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:18,094,020 – 18,104,373
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
14 transcription factors
Source
Cell type
CTCF 2 datasets
ChIP HCT-116 GSE131606.CTCF.HCT-116 325 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 353 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 122 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 289 bp overlap
EZH2 1 dataset
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 349 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 353 bp overlap
ChIP DE DE-FOXA2-2 353 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 353 bp overlap
ChIP DE DE-GATA4-2 353 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 353 bp overlap
ChIP DE DE-GATA6-2 353 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 350 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 353 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 353 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 266 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 353 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 353 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 336 bp overlap
JUN 5 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 353 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 353 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 353 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 264 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 353 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 328 bp overlap
NFE2 1 dataset
ChIP K562 ENCFF047YKA 89 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 288 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 316 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 285 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 305 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 317 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 353 bp overlap
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