chr9 : 4,308,549 4,309,237
688 bp 11 TFs 2 linked genes
This 688 bp open chromatin element is linked to GLIS3 and GLIS3-AS2 and is bound by 11 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
GLIS3 8.5 kb Proximal Proximity
GLIS3-AS2 9.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:4,303,549 – 4,314,237
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
11 transcription factors
Source
Cell type
BRD2 1 dataset
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 54 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 147 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 488 bp overlap
ChIP DE DE-FOXA2-2 431 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 559 bp overlap
ChIP DE DE-GATA4-2 688 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 633 bp overlap
ChIP DE DE-GATA6-2 688 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 129 bp overlap
MAZ 1 dataset
ChIP HEK293 GSE76494.MAZ.HEK293 184 bp overlap
MYOG 1 dataset
ChIP RH4 GSE83726.MYOG.RH4 222 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 238 bp overlap
SOX2 1 dataset
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 688 bp overlap
ZNF143 1 dataset
ChIP HeLa GSE39263.ZNF143.HeLa 179 bp overlap