chr9 : 2,717,408 2,717,613
205 bp 16 TFs 1 linked gene
This 205 bp open chromatin element is linked to KCNV2 and is bound by 16 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
KCNV2 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:2,712,408 – 2,722,613
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
CREBBP 1 dataset
ChIP retina_Hu33 GSE137311.CREBBP.retina_Hu33 194 bp overlap
CRX 4 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 182 bp overlap
ChIP retina_Hu21 GSE137311.CRX.retina_Hu21 205 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 205 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 205 bp overlap
CTCF 4 datasets
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 60 bp overlap
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 171 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 205 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 205 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 69 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 164 bp overlap
ChIP DE DE-FOXA2-2 205 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 65 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 156 bp overlap
ChIP DE DE-GATA4-2 205 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 165 bp overlap
GATA6 1 dataset
ChIP DE DE-GATA6-2 205 bp overlap
MEF2D 3 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 205 bp overlap
ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 205 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 205 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 205 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 205 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 205 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 205 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 57 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 205 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 205 bp overlap
TOP2A 1 dataset
ChIP KG-1_etoposide GSE114048.TOP2A.KG-1_etoposide 75 bp overlap