chr8 : 144,410,465 144,410,876
411 bp 19 TFs 3 linked genes
This 411 bp open chromatin element is linked to ENSG00000272115, CPSF1, and SLC39A4 and is bound by 19 transcription factors.
Linked Genes
3 genes
Distance
Gene Expression Dist. to TSS Distance Link type
ENSG00000272115 974 bp At TSS Proximity
CPSF1 1.1 kb Proximal Proximity
SLC39A4 2.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:144,405,465 – 144,415,876
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
19 transcription factors
Source
Cell type
DPF2 1 dataset
ChIP K562 ENCFF775HUO 184 bp overlap
EP300 2 datasets
ChIP sigmoid colon ENCFF524QSR 93 bp overlap
ChIP sigmoid colon ENCFF953ZIP 139 bp overlap
ETV1 1 dataset
ChIP GIST GSE22441.ETV1.GIST 54 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 403 bp overlap
ChIP DE DE-GATA4-2 411 bp overlap
ChIP foregut GSE117136.GATA4.foregut 342 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 400 bp overlap
ChIP DE DE-GATA6-2 411 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 370 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 282 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 250 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 411 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 279 bp overlap
ChIP foregut GSE117136.GATA6.foregut 288 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 301 bp overlap
IRF9 1 dataset
ChIP K562 ENCFF346PQL 139 bp overlap
MED12 1 dataset
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 71 bp overlap
POLR2A 6 datasets
ChIP K562 ENCFF215CWW 72 bp overlap
ChIP K562 ENCFF836GHX 148 bp overlap
ChIP sigmoid colon ENCFF101ILL 143 bp overlap
ChIP sigmoid colon ENCFF725QFT 95 bp overlap
ChIP sigmoid colon ENCFF748YVT 106 bp overlap
ChIP sigmoid colon ENCFF754JQR 145 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 118 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 264 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 240 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 233 bp overlap
SMARCA4 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 254 bp overlap
SMARCC1 1 dataset
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 117 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 272 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 332 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 207 bp overlap
ZNF148 1 dataset
ChIP K562 ENCFF352SDL 85 bp overlap
ZNF512 1 dataset
ChIP K562 ENCFF601EMZ 221 bp overlap
ZNF592 1 dataset
ChIP K562 ENCFF547OSS 112 bp overlap