chr1 : 164,565,089 164,565,258
169 bp 20 TFs 1 linked gene
This 169 bp open chromatin element is linked to PBX1 and is bound by 20 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PBX1 5.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:164,560,089 – 164,570,258
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
BRCA1 1 dataset
ChIP K-562 ENCSR223MLH.BRCA1.K-562 169 bp overlap
BRD4 2 datasets
ChIP HFOB_DIFF GSE82295.BRD4.HFOB_DIFF 169 bp overlap
ChIP SUM185_DMSO GSE63581.BRD4.SUM185_DMSO 94 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 74 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 169 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 169 bp overlap
ChIP DE DE-FOXA2-2 169 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 169 bp overlap
ChIP DE DE-GATA4-2 169 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 169 bp overlap
ChIP DE DE-GATA6-2 169 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 114 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 169 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 169 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 169 bp overlap
KMT2A 1 dataset
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 169 bp overlap
MED12 1 dataset
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 99 bp overlap
MEN1 1 dataset
ChIP MCF-7 GSE85317.MEN1.MCF-7 147 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 104 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 169 bp overlap
SOX2 1 dataset
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 169 bp overlap
SPDEF 1 dataset
ChIP A-549 GSE86957.SPDEF.A-549 169 bp overlap
VDR 3 datasets
ChIP LNCaP GSE64656.VDR.LNCaP 168 bp overlap
ChIP kidney-cortex GSE129585.VDR.kidney-cortex 169 bp overlap
ChIP primary-prostate-epithelial-cell GSE124576.VDR.primary-prostate-epithelial-cell 169 bp overlap
ZNF18 1 dataset
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 169 bp overlap
ZSCAN4 1 dataset
ChIP HEK293 ENCFF381BKT 50 bp overlap