chr7 : 148,344,506 148,344,751
245 bp 17 TFs 1 linked gene
This 245 bp open chromatin element is linked to CNTNAP2 and is bound by 17 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
CNTNAP2 5.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:148,339,506 – 148,349,751
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
17 transcription factors
Source
Cell type
BNC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 206 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 245 bp overlap
CREB5 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR758GOA.CREB5.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 203 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 245 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 245 bp overlap
ChIP DE DE-FOXA2-2 245 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 245 bp overlap
ChIP DE DE-GATA4-2 245 bp overlap
ChIP foregut GSE117136.GATA4.foregut 240 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 245 bp overlap
ChIP DE DE-GATA6-2 245 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 243 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 245 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 245 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 245 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 245 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 245 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 245 bp overlap
ChIP foregut GSE117136.GATA6.foregut 185 bp overlap
ISL1 2 datasets
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 123 bp overlap
ChIP SK-N-SH ENCFF285GEQ 207 bp overlap
PHOX2B 1 dataset
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 144 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 245 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 245 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 188 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 241 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 245 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 243 bp overlap
SMARCA4 2 datasets
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 245 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 245 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 240 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 245 bp overlap
TEAD4 1 dataset
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 245 bp overlap