chr1 : 159,614,249 159,614,638
389 bp 13 TFs 0 linked genes
This 389 bp open chromatin element has no linked target genes and is bound by 13 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:159,609,249 – 159,619,638
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
13 transcription factors
Source
Cell type
BRD4 3 datasets
ChIP SUM159PT_DMSO_24h GSE87418.BRD4.SUM159PT_DMSO_24h 299 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 301 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 389 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 265 bp overlap
DUX4 1 dataset
ChIP HEK293 GSE75791.DUX4.HEK293 182 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 51 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 251 bp overlap
GATA6 3 datasets
ChIP DE_D1 S41-DE-d1-GATA6-exp2 274 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 294 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 255 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 263 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 255 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 287 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 307 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 358 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 315 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 376 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 389 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 350 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 298 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 305 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 290 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 334 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 325 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 272 bp overlap
SPI1 1 dataset
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 126 bp overlap
TBX5 1 dataset
ChIP G296S_4 GSE85628.TBX5.G296S_4 197 bp overlap