chr1 : 156,427,079 156,427,507
428 bp 12 TFs 2 linked genes
This 428 bp open chromatin element is linked to MIR9-1 and MIR9-1HG and is bound by 12 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
MIR9-1 6.7 kb Proximal Proximity
MIR9-1HG 6.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:156,422,079 – 156,432,507
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
12 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 151 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 250 bp overlap
EZH2 6 datasets
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 377 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 229 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 147 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 126 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 225 bp overlap
ChIP neural_progenitor ENCSR069DPL.EZH2.neural_progenitor 360 bp overlap
EZH2_phosphoT487 3 datasets
ChIP DOHH2 ENCSR562NOP.EZH2_phosphoT487.DOHH2 428 bp overlap
ChIP OCI-Ly7 ENCSR565XSL.EZH2_phosphoT487.OCI-Ly7 279 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR886KKK.EZH2_phosphoT487.neuron_bipolar_doxy_4d 428 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 125 bp overlap
ChIP DE DE-FOXA2-1 428 bp overlap
ChIP DE DE-FOXA2-2 428 bp overlap
GATA4 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 171 bp overlap
ChIP DE DE-GATA4-1 428 bp overlap
ChIP DE DE-GATA4-2 428 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 428 bp overlap
ChIP DE DE-GATA6-2 428 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 265 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 407 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 265 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 390 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 300 bp overlap
SMARCA4 1 dataset
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 156 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 255 bp overlap
SUZ12 2 datasets
ChIP hiPSC GSE124903.SUZ12.hiPSC 428 bp overlap
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 323 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 254 bp overlap