chr1 : 119,651,267 119,651,393
126 bp 14 TFs 2 linked genes
This 126 bp open chromatin element is linked to PHGDH and ZNF697 and is bound by 14 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
PHGDH 2.9 kb Proximal Proximity
ZNF697 3.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:119,646,267 – 119,656,393
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
14 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP SGBS_TNF GSE64233.BRD4.SGBS_TNF 126 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 126 bp overlap
ESRRA 6 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 126 bp overlap
ChIP BT-474_EGF GSE81651.ESRRA.BT-474_EGF 126 bp overlap
ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 126 bp overlap
ChIP SK-BR-3 GSE81651.ESRRA.SK-BR-3 126 bp overlap
ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 126 bp overlap
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 126 bp overlap
EZH2 2 datasets
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 126 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 92 bp overlap
MED1 1 dataset
ChIP SGBS GSE64233.MED1.SGBS 126 bp overlap
PRDM1 2 datasets
ChIP HEK293 ENCFF302TBP 126 bp overlap
ChIP HEK293 GSE76494.PRDM1.HEK293 97 bp overlap
RELA 3 datasets
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 126 bp overlap
ChIP IMR-90_TNF GSE43070.RELA.IMR-90_TNF 126 bp overlap
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 99 bp overlap
RNF2 5 datasets
ChIP K-562 ENCSR820GND.RNF2.K-562 104 bp overlap
ChIP K-562 ENCSR076YPO.RNF2.K-562 119 bp overlap
ChIP K-562 ENCSR138FUZ.RNF2.K-562 126 bp overlap
ChIP K562 ENCFF653BQJ 72 bp overlap
ChIP K562 ENCFF653BQJ 75 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 117 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 126 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 126 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 126 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 126 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 126 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 126 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 126 bp overlap
SMARCA4 1 dataset
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 68 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 126 bp overlap