chr6 : 54,635,176 54,635,447
271 bp 11 TFs 0 linked genes
This 271 bp open chromatin element has no linked target genes and is bound by 11 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:54,630,176 – 54,640,447
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
11 transcription factors
Source
Cell type
CTCF 1 dataset
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 171 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 191 bp overlap
GATA4 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 122 bp overlap
ChIP DE DE-GATA4-1 248 bp overlap
ChIP DE DE-GATA4-2 271 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 271 bp overlap
ChIP DE DE-GATA6-2 271 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 271 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 271 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 271 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 271 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 271 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 271 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 271 bp overlap
JUN 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 226 bp overlap
MYB 1 dataset
ChIP Loucy GSE94000.MYB.Loucy 271 bp overlap
PPARG 1 dataset
ChIP HUVEC-C_DMSO_HYPO GSE50144.PPARG.HUVEC-C_DMSO_HYPO 147 bp overlap
REST 1 dataset
ChIP PANC-1 ENCSR000BPK.REST.PANC-1 120 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 200 bp overlap
TAL1 1 dataset
ChIP CHRF28811 ERP008568.TAL1.CHRF28811 234 bp overlap
ZNF823 1 dataset
ChIP HEK293T GSE78099.ZNF823.HEK293T 189 bp overlap