chr1 : 105,028,192 105,028,366
174 bp 12 TFs 0 linked genes
This 174 bp open chromatin element has no linked target genes and is bound by 12 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:105,023,192 – 105,033,366
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
12 transcription factors
Source
Cell type
CTCF 131 datasets
ChIP 81-3 ERP002246.CTCF.81-3 105 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 174 bp overlap
ChIP A673 ENCFF123WOM 174 bp overlap
ChIP B-cell ENCSR000AUV.CTCF.B-cell 174 bp overlap
ChIP BC-3 GSE135740.CTCF.BC-3 174 bp overlap
ChIP BE2C ENCFF757SRF 174 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 174 bp overlap
ChIP BL41 GSE31485.CTCF.BL41 93 bp overlap
ChIP DND-41 ENCFF913MRA 174 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 126 bp overlap
ChIP DOHH2 ENCFF637WNW 174 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 174 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 174 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 174 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 174 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 174 bp overlap
ChIP GM06990 ENCFF471OQT 174 bp overlap
ChIP GM06990 ENCSR000DQW.CTCF.GM06990 131 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 174 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 174 bp overlap
ChIP GM10248 ENCFF083HVS 165 bp overlap
ChIP GM10248 ENCFF226VLZ 155 bp overlap
ChIP GM10266 ENCFF241YYF 157 bp overlap
ChIP GM10266 ENCFF892KUY 157 bp overlap
ChIP GM12864 ENCFF357DQE 174 bp overlap
ChIP GM12865 ENCFF067GFI 174 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 169 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 128 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 107 bp overlap
ChIP GM12872 ENCFF697BYI 174 bp overlap
ChIP GM12873 ENCFF711LOS 174 bp overlap
ChIP GM12873 ENCSR000DRP.CTCF.GM12873 159 bp overlap
ChIP GM12874 ENCSR000DRR.CTCF.GM12874 172 bp overlap
ChIP GM12875 ENCFF081UCQ 174 bp overlap
ChIP GM12875 ENCSR000DRU.CTCF.GM12875 136 bp overlap
ChIP GM12878 ENCFF217EAX 174 bp overlap
ChIP GM12878 ENCFF485TGR 174 bp overlap
ChIP GM12878 ENCFF511URZ 174 bp overlap
ChIP GM12878 ENCFF635MMB 174 bp overlap
ChIP GM12878 GSE76922.CTCF.GM12878 174 bp overlap
ChIP GM12878 ENCSR000DKV.CTCF.GM12878 174 bp overlap
ChIP GM12878 ENCSR000DZN.CTCF.GM12878 166 bp overlap
ChIP GM12878 ENCSR000AKB.CTCF.GM12878 165 bp overlap
ChIP GM12878 ENCSR000DRZ.CTCF.GM12878 116 bp overlap
ChIP GM13977 ENCFF528ESQ 153 bp overlap
ChIP GM13977 ENCSR000DLB.CTCF.GM13977 156 bp overlap
ChIP GM17942 GSE76922.CTCF.GM17942 174 bp overlap
ChIP GM23338 ENCFF531QOI 174 bp overlap
ChIP GM23338 ENCFF772DML 153 bp overlap
ChIP H1 ENCFF414GZI 174 bp overlap
ChIP H1 ENCFF764RHO 174 bp overlap
ChIP H9 ENCFF152GTF 174 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 101 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 119 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 174 bp overlap
ChIP ID00015 GSE76922.CTCF.ID00015 174 bp overlap
ChIP ID00016 GSE76922.CTCF.ID00016 174 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 139 bp overlap
ChIP K-562_5635 GSE131349.CTCF.K-562_5635 156 bp overlap
ChIP K-562_MonoN GSE137216.CTCF.K-562_MonoN 136 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 174 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 174 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 174 bp overlap
ChIP MDA-MB-435_Asynchronous GSE102019.CTCF.MDA-MB-435_Asynchronous 171 bp overlap
ChIP MM1-S ENCSR402IDP.CTCF.MM1-S 174 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 142 bp overlap
ChIP NCI-H929 ENCFF305JAB 174 bp overlap
ChIP NCI-H929 ENCFF305JAB 140 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 174 bp overlap
ChIP OCI-LY1 ENCFF455ESK 174 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 174 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 174 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 174 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 174 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 174 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 174 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 174 bp overlap
ChIP Peyers-patch ENCSR375VXU.CTCF.Peyers-patch 171 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 174 bp overlap
ChIP RWPE2 ENCFF911IEE 174 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 123 bp overlap
ChIP SK-N-SH ENCFF575DMG 174 bp overlap
ChIP SK-N-SH ENCFF731NJX 174 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 174 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 149 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 174 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 142 bp overlap
ChIP SU-DHL-6 ENCSR125DKL.CTCF.SU-DHL-6 174 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 174 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 143 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 174 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 174 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 174 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 174 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-120m-Flavo-000m 174 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 159 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 174 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h 171 bp overlap
ChIP THP-1_siNIPBL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siNIPBL-eGFP-Pam3csk-4h 147 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h 174 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 174 bp overlap
ChIP VCaP_R1881 GSE84432.CTCF.VCaP_R1881 174 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 174 bp overlap
ChIP brain ENCFF163BBN 174 bp overlap
ChIP brain ENCFF685VRG 174 bp overlap
ChIP brain ENCFF685VRG 174 bp overlap
ChIP chondrocyte ENCFF134ORZ 174 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 114 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 136 bp overlap
ChIP delta-47 GSE70764.CTCF.delta-47 174 bp overlap
ChIP endodermal cell ENCFF471YCZ 174 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 135 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 174 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 174 bp overlap
ChIP islet ERP004003.CTCF.islet 124 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 174 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 142 bp overlap
ChIP myotube ENCFF981UHL 174 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 174 bp overlap
ChIP nephron ENCFF589HXU 174 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 174 bp overlap
ChIP neural progenitor cell ENCFF420RBO 174 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 174 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 174 bp overlap
ChIP osteocyte ENCFF929FPD 174 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 143 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 174 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 174 bp overlap
ChIP spleen ENCFF604DQF 168 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 174 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 62 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 105 bp overlap
IRF4 1 dataset
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 82 bp overlap
RAD21 32 datasets
ChIP GM12878 ENCFF046CBW 174 bp overlap
ChIP GM12878 ENCFF101UQZ 114 bp overlap
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 174 bp overlap
ChIP GM12878 ENCSR000EAC.RAD21.GM12878 174 bp overlap
ChIP H1 ENCFF698EWO 173 bp overlap
ChIP H1 ENCFF967OJF 136 bp overlap
ChIP HeLa-Tet-On GSE112028.RAD21.HeLa-Tet-On 174 bp overlap
ChIP Ishikawa ENCFF570JVV 174 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 154 bp overlap
ChIP SK-N-SH ENCFF747MAS 174 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 174 bp overlap
ChIP THP-1 GSE55407.RAD21.THP-1 143 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-000m 174 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-020m-Flavo-000m 174 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-025m-Flavo-000m 174 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-030m-Flavo-000m 112 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-045m-Flavo-000m 174 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-060m-Flavo-000m 128 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-120m-Flavo-000m 156 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.RAD21.THP-1_Pam3csk-150m-Flavo-030m 174 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-360m-Flavo-240m 174 bp overlap
ChIP THP-1_eGFP-IFNb GSE103477.RAD21.THP-1_eGFP-IFNb 174 bp overlap
ChIP THP-1_siNIPBL-eGFP-Pam3csk-4h GSE103477.RAD21.THP-1_siNIPBL-eGFP-Pam3csk-4h 149 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 174 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 174 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 174 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 133 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 168 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 166 bp overlap
ChIP lymphoblast_mut GSE155324.RAD21.lymphoblast_mut 174 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 174 bp overlap
ChIP neural cell ENCFF564MOT 167 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 148 bp overlap
SMC3 3 datasets
ChIP GM12878 ENCFF085RLZ 174 bp overlap
ChIP GM12878 ENCSR000DZP.SMC3.GM12878 169 bp overlap
ChIP neural ENCSR404BPV.SMC3.neural 174 bp overlap
STAG1 2 datasets
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 119 bp overlap
ChIP HepG2 ENCFF843EBZ 174 bp overlap
STAG2 2 datasets
ChIP HL-60 GSE131577.STAG2.HL-60 115 bp overlap
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 104 bp overlap
TRIM22 3 datasets
ChIP GM12878 ENCFF919OMX 174 bp overlap
ChIP GM12878 ENCFF919OMX 96 bp overlap
ChIP GM12878 ENCSR835XKS.TRIM22.GM12878 174 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 163 bp overlap
ZNF654 2 datasets
ChIP HEK293 ENCFF636WIC 174 bp overlap
ChIP HEK293 ENCSR504VDV.ZNF654.HEK293 174 bp overlap