chr5 : 87,558,384 – 87,558,891

507 bp 47 TFs 0 linked genes

This 507 bp open chromatin element has no linked target genes and is bound by 47 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

47 transcription factors

BARX2 1 dataset

Motif DE_48h DE_48h-BARX2_MA1471.2 9 bp overlap

BCL6 1 dataset

Motif DE_48h DE_48h-BCL6_MA0463.3 13 bp overlap

BCL6B 1 dataset

Motif DE_48h DE_48h-BCL6B_MA0731.1 17 bp overlap

DUX4 2 datasets

Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap

ChIP WA01 GSE94322.DUX4.WA01 442 bp overlap

DUXA 1 dataset

Motif DE_48h DE_48h-DUXA_MA0884.2 13 bp overlap

EBF1 1 dataset

Motif DE_48h DE_48h-EBF1_MA0154.5 11 bp overlap

ERF 2 datasets

Motif DE_48h DE_48h-ERF_MA0760.2 9 bp overlap

Motif DE_60h DE_60h-ERF_MA0760.2 9 bp overlap

ERF::FOXI1 2 datasets

Motif DE_48h DE_48h-ERFFOXI1_MA1935.2 10 bp overlap

Motif DE_60h DE_60h-ERFFOXI1_MA1935.2 10 bp overlap

ERF::FOXO1 2 datasets

Motif DE_48h DE_48h-ERFFOXO1_MA1936.2 12 bp overlap

Motif DE_60h DE_60h-ERFFOXO1_MA1936.2 12 bp overlap

ETS1 2 datasets

Motif DE_48h DE_48h-ETS1_MA0098.4 9 bp overlap

Motif DE_60h DE_60h-ETS1_MA0098.4 9 bp overlap

ETS2 2 datasets

Motif DE_48h DE_48h-ETS2_MA1484.2 9 bp overlap

Motif DE_60h DE_60h-ETS2_MA1484.2 9 bp overlap

ETV1 2 datasets

Motif DE_48h DE_48h-ETV1_MA0761.3 9 bp overlap

Motif DE_60h DE_60h-ETV1_MA0761.3 9 bp overlap

ETV2 2 datasets

Motif DE_48h DE_48h-ETV2_MA0762.2 9 bp overlap

Motif DE_60h DE_60h-ETV2_MA0762.2 9 bp overlap

ETV2::FOXI1 2 datasets

Motif DE_48h DE_48h-ETV2FOXI1_MA1942.2 11 bp overlap

Motif DE_60h DE_60h-ETV2FOXI1_MA1942.2 11 bp overlap

ETV5::FOXI1 2 datasets

Motif DE_48h DE_48h-ETV5FOXI1_MA1946.2 12 bp overlap

Motif DE_60h DE_60h-ETV5FOXI1_MA1946.2 12 bp overlap

Ebf4 1 dataset

Motif DE_48h DE_48h-Ebf4_MA2122.1 11 bp overlap

Erg 2 datasets

Motif DE_48h DE_48h-Erg_MA0474.4 10 bp overlap

Motif DE_60h DE_60h-Erg_MA0474.4 10 bp overlap

FLI1::DRGX 2 datasets

Motif DE_48h DE_48h-FLI1DRGX_MA1949.2 14 bp overlap

Motif DE_60h DE_60h-FLI1DRGX_MA1949.2 14 bp overlap

FLI1::FOXI1 2 datasets

Motif DE_48h DE_48h-FLI1FOXI1_MA1950.2 11 bp overlap

Motif DE_60h DE_60h-FLI1FOXI1_MA1950.2 11 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 409 bp overlap

ChIP DE DE-FOXA2-2 449 bp overlap

FOXD2 2 datasets

Motif DE_48h DE_48h-FOXD2_MA0847.4 11 bp overlap

Motif DE_60h DE_60h-FOXD2_MA0847.4 11 bp overlap

FOXJ2::ELF1 2 datasets

Motif DE_48h DE_48h-FOXJ2ELF1_MA1952.2 11 bp overlap

Motif DE_60h DE_60h-FOXJ2ELF1_MA1952.2 11 bp overlap

FOXO1::ELF1 2 datasets

Motif DE_48h DE_48h-FOXO1ELF1_MA1953.2 13 bp overlap

Motif DE_60h DE_60h-FOXO1ELF1_MA1953.2 13 bp overlap

FOXO1::ELK1 2 datasets

Motif DE_48h DE_48h-FOXO1ELK1_MA1954.2 13 bp overlap

Motif DE_60h DE_60h-FOXO1ELK1_MA1954.2 13 bp overlap

FOXO1::ELK3 2 datasets

Motif DE_48h DE_48h-FOXO1ELK3_MA1955.2 13 bp overlap

Motif DE_60h DE_60h-FOXO1ELK3_MA1955.2 13 bp overlap

GABPA 2 datasets

Motif DE_48h DE_48h-GABPA_MA0062.4 10 bp overlap

Motif DE_60h DE_60h-GABPA_MA0062.4 10 bp overlap

GATA1 1 dataset

Motif DE_48h DE_48h-GATA1_MA0035.5 7 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 440 bp overlap

ChIP DE DE-GATA4-2 507 bp overlap

ChIP foregut GSE117136.GATA4.foregut 420 bp overlap

GATA6 5 datasets

ChIP DE DE-GATA6-1 413 bp overlap

ChIP DE DE-GATA6-2 425 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 459 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 353 bp overlap

ChIP foregut GSE117136.GATA6.foregut 411 bp overlap

IKZF1 2 datasets

Motif DE_48h DE_48h-IKZF1_MA1508.2 8 bp overlap

Motif DE_60h DE_60h-IKZF1_MA1508.2 8 bp overlap

IKZF2 2 datasets

Motif DE_48h DE_48h-IKZF2_MA2326.1 6 bp overlap

Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap

IRF3 1 dataset

Motif DE_48h DE_48h-IRF3_MA1418.2 17 bp overlap

IRF4 1 dataset

Motif DE_48h DE_48h-IRF4_MA1419.2 14 bp overlap

IRF5 1 dataset

Motif DE_48h DE_48h-IRF5_MA1420.1 14 bp overlap

Ikzf3 2 datasets

Motif DE_48h DE_48h-Ikzf3_MA1992.2 9 bp overlap

Motif DE_60h DE_60h-Ikzf3_MA1992.2 9 bp overlap

Mecom 1 dataset

Motif DE_48h DE_48h-Mecom_MA0029.2 11 bp overlap

PHOX2A 1 dataset

Motif DE_48h DE_48h-PHOX2A_MA0713.1 11 bp overlap

PHOX2B 1 dataset

Motif DE_48h DE_48h-PHOX2B_MA0681.3 12 bp overlap

POU2F3 2 datasets

Motif DE_48h DE_48h-POU2F3_MA0627.3 9 bp overlap

Motif DE_60h DE_60h-POU2F3_MA0627.3 9 bp overlap

PRDM1 1 dataset

ChIP fetal_testis GSE100639.PRDM1.fetal_testis 254 bp overlap

PROP1 1 dataset

Motif DE_48h DE_48h-PROP1_MA0715.1 11 bp overlap

Prdm14 2 datasets

Motif DE_48h DE_48h-Prdm14_MA1998.2 8 bp overlap

Motif DE_60h DE_60h-Prdm14_MA1998.2 8 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 255 bp overlap

SMAD2_3 1 dataset

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 246 bp overlap

SNAI2 1 dataset

ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 136 bp overlap

ZNF175 2 datasets

Motif DE_48h DE_48h-ZNF175_MA2332.1 9 bp overlap

Motif DE_60h DE_60h-ZNF175_MA2332.1 9 bp overlap

ZNF816 1 dataset

Motif DE_48h DE_48h-ZNF816_MA1719.2 15 bp overlap