chr5 : 61,915,721 61,916,004
283 bp 51 TFs 0 linked genes
This 283 bp open chromatin element has no linked target genes and is bound by 51 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:61,910,721 – 61,921,004
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
51 transcription factors
Source
Cell type
CTCF 77 datasets
ChIP A-549 ENCSR000AUF.CTCF.A-549 233 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 151 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 252 bp overlap
ChIP A549 ENCFF034FVO 226 bp overlap
ChIP A673 ENCFF123WOM 283 bp overlap
ChIP BE2C ENCFF757SRF 266 bp overlap
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
ChIP GM12864 ENCFF357DQE 204 bp overlap
ChIP GM12878 ENCFF511URZ 205 bp overlap
ChIP GM23338 ENCFF531QOI 235 bp overlap
ChIP GM23338 ENCFF772DML 126 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 202 bp overlap
ChIP H1 ENCFF230QSV 154 bp overlap
ChIP H1 ENCFF414GZI 193 bp overlap
ChIP H1 ENCFF764RHO 156 bp overlap
ChIP H9 ENCFF152GTF 246 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 162 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 159 bp overlap
ChIP HCT116 ENCFF003KHP 283 bp overlap
ChIP HCT116 ENCFF209YMI 256 bp overlap
ChIP HEK293 ENCFF498RMM 261 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 205 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 137 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 158 bp overlap
ChIP HeLa-S3 ENCFF565UFR 161 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 262 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 221 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 218 bp overlap
ChIP HepG2 ENCFF348BUL 194 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 197 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 115 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 259 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 276 bp overlap
ChIP K562 ENCFF082GOI 185 bp overlap
ChIP K562 ENCFF400DFR 206 bp overlap
ChIP K562 ENCFF430KTH 283 bp overlap
ChIP K562 ENCFF598YSU 235 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 214 bp overlap
ChIP Loucy ENCFF359TVQ 141 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 193 bp overlap
ChIP MCF-7 ENCFF139NQI 217 bp overlap
ChIP MCF-7 ENCFF162GNE 227 bp overlap
ChIP MCF-7 ENCFF198DQX 231 bp overlap
ChIP MCF-7 ENCFF414SZG 153 bp overlap
ChIP MCF-7 ENCFF494VXA 201 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 203 bp overlap
ChIP NCI-H929 ENCFF305JAB 283 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 170 bp overlap
ChIP OCI-LY1 ENCFF455ESK 239 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 283 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 283 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 206 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 165 bp overlap
ChIP Panc1 ENCFF056JQX 283 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 174 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 162 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 261 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 146 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 101 bp overlap
ChIP WTC11 ENCFF658QVH 282 bp overlap
ChIP endodermal cell ENCFF471YCZ 206 bp overlap
ChIP endodermal cell ENCFF471YCZ 223 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 283 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 231 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 146 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 283 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 279 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 153 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 154 bp overlap
ChIP keratinocyte ENCFF046PBT 185 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 102 bp overlap
ChIP myotube ENCFF981UHL 283 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 207 bp overlap
ChIP neural progenitor cell ENCFF420RBO 208 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 205 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 162 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 283 bp overlap
CTCFL 1 dataset
Motif DE_12h DE_12h-CTCFL_MA1102.3 8 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 212 bp overlap
ESR1 1 dataset
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 52 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
HNF4A 1 dataset
Motif DE_12h DE_12h-HNF4A_MA0114.5 9 bp overlap
HNF4G 1 dataset
Motif DE_12h DE_12h-HNF4G_MA0484.3 9 bp overlap
IKZF1 1 dataset
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
INSM1 1 dataset
Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
NFYB 1 dataset
Motif DE_12h DE_12h-NFYB_MA0502.3 9 bp overlap
NRL 1 dataset
Motif DE_12h DE_12h-NRL_MA0842.3 12 bp overlap
PKNOX2 1 dataset
Motif DE_12h DE_12h-PKNOX2_MA0783.1 12 bp overlap
RAD21 3 datasets
ChIP H1 ENCFF698EWO 176 bp overlap
ChIP H1 ENCFF967OJF 214 bp overlap
ChIP HCT116 ENCFF568PEO 160 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX4 1 dataset
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
Sox11 1 dataset
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
Sox6 1 dataset
Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap
TGIF1 1 dataset
Motif DE_12h DE_12h-TGIF1_MA0796.1 12 bp overlap
TP63 1 dataset
ChIP keratinocyte GSE33571.TP63.keratinocyte 134 bp overlap
ZNF175 1 dataset
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
ZNF680 2 datasets
ChIP HEK293 ENCFF418WHE 104 bp overlap
ChIP HEK293 ENCSR307CKC.ZNF680.HEK293 97 bp overlap
Zfp961 1 dataset
Motif DE_12h DE_12h-Zfp961_MA2126.1 8 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap