chr4 : 170,805,361 170,805,687
326 bp 25 TFs 0 linked genes
This 326 bp open chromatin element has no linked target genes and is bound by 25 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:170,800,361 – 170,810,687
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
25 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE63202.AR.LNCaP 160 bp overlap
CTCF 57 datasets
ChIP A-549 ENCSR000DPF.CTCF.A-549 149 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 148 bp overlap
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 229 bp overlap
ChIP GM23338 ENCFF531QOI 300 bp overlap
ChIP H54 ENCFF255TVO 210 bp overlap
ChIP H9 ENCFF152GTF 326 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 254 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 213 bp overlap
ChIP HEK293 ENCFF498RMM 230 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 150 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 226 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 147 bp overlap
ChIP HepG2 ENCFF127KUP 231 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 166 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 131 bp overlap
ChIP K-562_12040 GSE131349.CTCF.K-562_12040 124 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 148 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 115 bp overlap
ChIP K-562_15173 GSE131349.CTCF.K-562_15173 151 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 165 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 147 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 133 bp overlap
ChIP K-562_CRISPRa_N4293 GSE131349.CTCF.K-562_CRISPRa_N4293 166 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.CTCF.K-562_dCas9-KRAB 158 bp overlap
ChIP K562 ENCFF598YSU 230 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 181 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 233 bp overlap
ChIP MCF-7 ENCFF139NQI 251 bp overlap
ChIP MCF-7 ENCFF162GNE 245 bp overlap
ChIP MCF-7 ENCFF198DQX 231 bp overlap
ChIP MCF-7 ENCFF210JUZ 325 bp overlap
ChIP MCF-7 ENCFF414SZG 191 bp overlap
ChIP MCF-7 ENCFF424NQR 51 bp overlap
ChIP MCF-7 ENCFF494VXA 231 bp overlap
ChIP MCF-7 ENCFF844STM 51 bp overlap
ChIP MCF-7 ENCFF954TUV 190 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 326 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 196 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 237 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 223 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 153 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 108 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 114 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 121 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 226 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 284 bp overlap
ChIP OCI-LY1 ENCFF455ESK 326 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 326 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 326 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 325 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 180 bp overlap
ChIP endodermal cell ENCFF471YCZ 326 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 208 bp overlap
ChIP neural progenitor cell ENCFF420RBO 313 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 297 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 241 bp overlap
EBF1 1 dataset
ChIP ASC GSE54889.EBF1.ASC 140 bp overlap
ESR1 11 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 161 bp overlap
ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 157 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 169 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 163 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 244 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 209 bp overlap
ChIP MCF-7_estradiol-Dex_4h GSE99626.ESR1.MCF-7_estradiol-Dex_4h 167 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 247 bp overlap
ChIP MCF-7_jc5852 GSE126004.ESR1.MCF-7_jc5852 275 bp overlap
ChIP MCF-7_jc5855 GSE126004.ESR1.MCF-7_jc5855 217 bp overlap
ChIP MCF-7_jc5856 GSE126004.ESR1.MCF-7_jc5856 226 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 264 bp overlap
KLF6 2 datasets
Motif DE_12h DE_12h-KLF6_MA1517.2 9 bp overlap
Motif DE_12h DE_12h-KLF6_MA1517.2 9 bp overlap
KLF9 2 datasets
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
ChIP GBM1A GSE62211.KLF9.GBM1A 102 bp overlap
NR2C1 1 dataset
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
NRIP1 1 dataset
ChIP MCF-7 ERP005838.NRIP1.MCF-7 152 bp overlap
Nr1H2 1 dataset
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
RARA 1 dataset
Motif DE_12h DE_12h-RARA_MA0730.1 17 bp overlap
RREB1 1 dataset
Motif DE_12h DE_12h-RREB1_MA0073.2 19 bp overlap
STAG1 1 dataset
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 131 bp overlap
THAP1 1 dataset
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 215 bp overlap
ZNF257 1 dataset
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
ZNF410 1 dataset
Motif DE_12h DE_12h-ZNF410_MA0752.2 16 bp overlap
ZSCAN4 1 dataset
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap
Znf423 1 dataset
Motif DE_12h DE_12h-Znf423_MA0116.1 15 bp overlap