chr4 : 112,651,007 112,651,505
498 bp 17 TFs 6 linked genes
This 498 bp open chromatin element is linked to 6 target genes and is bound by 17 transcription factors.
Linked Genes
6 genes
Gene Expression Dist. to TSS Distance Link type
MIR302CHG 2.3 kb Proximal Proximity
MIR302B 2.5 kb Proximal Proximity
MIR302C 2.6 kb Proximal Proximity
MIR302A 2.8 kb Proximal Proximity
MIR302D 2.9 kb Proximal Proximity
LARP7 5.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:112,646,007 – 112,656,505
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
17 transcription factors
Source
Cell type
CHD1 2 datasets
ChIP H1 ENCFF998XEK 202 bp overlap
ChIP WA01 ENCSR000EBU.CHD1.WA01 134 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 497 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 213 bp overlap
ChIP DE DE-FOXA2-1 498 bp overlap
ChIP DE DE-FOXA2-2 498 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 498 bp overlap
ChIP DE DE-GATA4-2 464 bp overlap
ChIP foregut GSE117136.GATA4.foregut 340 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 368 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-1 397 bp overlap
ChIP DE DE-GATA6-2 459 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 345 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 498 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 371 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 498 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 498 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 411 bp overlap
ChIP foregut GSE117136.GATA6.foregut 325 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 315 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 317 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 322 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 376 bp overlap
KMT2A 1 dataset
ChIP OCI-AML-3_DMSO GSE129636.KMT2A.OCI-AML-3_DMSO 251 bp overlap
NANOG 1 dataset
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 263 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 308 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 290 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 485 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 445 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 311 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 159 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 152 bp overlap
TAF7 4 datasets
ChIP H1 ENCFF061XZZ 337 bp overlap
ChIP H1 ENCFF061XZZ 229 bp overlap
ChIP WA01 ENCSR000BLU.TAF7.WA01 89 bp overlap
ChIP WA01 ENCSR000BLU.TAF7.WA01 300 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 284 bp overlap