chr4 : 92,273,895 92,274,530
635 bp 18 TFs 1 linked gene
This 635 bp open chromatin element is linked to LNCPRESS2 and is bound by 18 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LNCPRESS2 2.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:92,268,895 – 92,279,530
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
18 transcription factors
Source
Cell type
Arid3a 1 dataset
Motif DE_24h DE_24h-Arid3a_MA0151.1 6 bp overlap
CHD1 2 datasets
ChIP H1 ENCFF998XEK 398 bp overlap
ChIP H1 ENCFF998XEK 295 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 635 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 358 bp overlap
ChIP DE DE-GATA6-2 275 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 512 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 395 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 513 bp overlap
Isl1 1 dataset
Motif DE_24h DE_24h-Isl1_MA1608.2 7 bp overlap
MYB 1 dataset
Motif DE_24h DE_24h-MYB_MA0100.4 6 bp overlap
NKX6-3 1 dataset
Motif DE_24h DE_24h-NKX6-3_MA1530.2 8 bp overlap
NR2F1 1 dataset
Motif DE_24h DE_24h-NR2F1_MA1537.2 13 bp overlap
PAX5 1 dataset
ChIP fetal_testis GSE100639.PAX5.fetal_testis 126 bp overlap
PLAG1 1 dataset
Motif DE_24h DE_24h-PLAG1_MA0163.1 14 bp overlap
Prdm4 1 dataset
Motif DE_24h DE_24h-Prdm4_MA1647.3 11 bp overlap
RFX4 1 dataset
Motif DE_24h DE_24h-RFX4_MA0799.3 13 bp overlap
Rfx6 1 dataset
Motif DE_24h DE_24h-Rfx6_MA1724.2 9 bp overlap
THRB 1 dataset
Motif DE_24h DE_24h-THRB_MA1574.2 13 bp overlap
ZNF410 1 dataset
Motif DE_24h DE_24h-ZNF410_MA0752.2 16 bp overlap