chr4 : 89,054,500 – 89,054,653
153 bp 12 TFs 1 linked gene
This 153 bp open chromatin element is linked to FAM13A and is bound by 12 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
FAM13A 2.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:89,049,500 – 89,059,653
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
12 transcription factors
Source
Cell type
GATA1 2 datasets
ChIP K-562 GSE107726.GATA1.K-562 153 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 107 bp overlap
GATA2 8 datasets
ChIP ESF GSE108408.GATA2.ESF 153 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 141 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 144 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 153 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P1 135 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 153 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P1 153 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P2 153 bp overlap
GATA3 1 dataset
ChIP T-47D ENCSR000BMX.GATA3.T-47D 102 bp overlap
GATA3_Nter 1 dataset
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 125 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 93 bp overlap
ChIP DE DE-GATA4-2 153 bp overlap
ChIP foregut GSE117136.GATA4.foregut 153 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 153 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 153 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 153 bp overlap
ChIP DE DE-GATA6-2 100 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 153 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 153 bp overlap
ChIP ESO-26 GSE132680.GATA6.ESO-26 153 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 77 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 153 bp overlap
ChIP OACP4-C GSE132680.GATA6.OACP4-C 153 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 140 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 153 bp overlap
ChIP K562 ENCFF348IBL 153 bp overlap
ChIP K562 ENCFF771OHZ 153 bp overlap
KMT2A 1 dataset
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 151 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 153 bp overlap
TEAD1 1 dataset
ChIP MSTO GSE68170.TEAD1.MSTO 147 bp overlap
TEAD4 1 dataset
ChIP T-47D_E2 GSE125594.TEAD4.T-47D_E2 153 bp overlap
ZNF366 1 dataset
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 153 bp overlap
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