chr4 : 85,257,512 85,258,558
1,046 bp 22 TFs 0 linked genes
This 1.0 kb open chromatin element has no linked target genes and is bound by 22 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:85,252,512 – 85,263,558
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
22 transcription factors
Source
Cell type
FOXA1 3 datasets
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 64 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 311 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 105 bp overlap
FOXA2 4 datasets
ChIP DE DE-FOXA2-1 137 bp overlap
ChIP DE DE-FOXA2-1 428 bp overlap
ChIP DE DE-FOXA2-2 242 bp overlap
ChIP DE DE-FOXA2-2 441 bp overlap
GATA2 1 dataset
Motif DE_72h DE_72h-GATA2_MA0036.4 7 bp overlap
GATA4 9 datasets
ChIP DE DE-GATA4-1 194 bp overlap
ChIP DE DE-GATA4-1 381 bp overlap
ChIP DE DE-GATA4-2 227 bp overlap
ChIP DE DE-GATA4-2 521 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 224 bp overlap
ChIP foregut GSE117136.GATA4.foregut 341 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 337 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 596 bp overlap
GATA5 1 dataset
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 356 bp overlap
ChIP DE DE-GATA6-2 305 bp overlap
ChIP DE DE-GATA6-2 477 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP foregut GSE117136.GATA6.foregut 440 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 1046 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 306 bp overlap
Gata3 1 dataset
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
HNF1B 1 dataset
ChIP foregut GSE117136.HNF1B.foregut 304 bp overlap
Mecom 1 dataset
Motif DE_72h DE_72h-Mecom_MA0029.2 11 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 176 bp overlap
PPARG 3 datasets
ChIP HT29_ROSIG_2H GSE77039.PPARG.HT29_ROSIG_2H 306 bp overlap
ChIP HT29_ROSIG_2H GSE77039.PPARG.HT29_ROSIG_2H 191 bp overlap
ChIP HT29_ROSIG_48H GSE77039.PPARG.HT29_ROSIG_48H 454 bp overlap
RORC 1 dataset
Motif DE_72h DE_72h-RORC_MA1151.2 10 bp overlap
RXR 1 dataset
ChIP LS180 GSE31939.RXR.LS180 195 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 185 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 516 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 258 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 194 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 218 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 530 bp overlap
SOX10 1 dataset
Motif DE_72h DE_72h-SOX10_MA0442.3 6 bp overlap
TRPS1 1 dataset
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
ZNF182 1 dataset
ChIP HEK293T GSE78099.ZNF182.HEK293T 231 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 82 bp overlap