chr4 : 75,509,172 75,509,373
201 bp 16 TFs 2 linked genes
This 201 bp open chromatin element is linked to RCHY1 and THAP6 and is bound by 16 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
RCHY1 4.9 kb Proximal Proximity
THAP6 5.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:75,504,172 – 75,514,373
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
ARNT 1 dataset
ChIP K-562 ENCSR155KHM.ARNT.K-562 201 bp overlap
EGR1 2 datasets
ChIP K-562 ENCSR000BNE.EGR1.K-562 127 bp overlap
ChIP K562 ENCFF006PJY 201 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 201 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 160 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 201 bp overlap
ChIP DE DE-GATA4-2 201 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 189 bp overlap
ChIP foregut GSE117136.GATA4.foregut 201 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 201 bp overlap
ChIP DE DE-GATA6-2 201 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 201 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 201 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 201 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 201 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 201 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 201 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 201 bp overlap
ChIP foregut GSE117136.GATA6.foregut 201 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 201 bp overlap
MNT 2 datasets
ChIP K562 ENCFF820IGH 201 bp overlap
ChIP K562 ENCFF820IGH 201 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 189 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 201 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 136 bp overlap
SMARCA4 4 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 179 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 195 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 200 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 167 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 151 bp overlap
SPI1 1 dataset
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 151 bp overlap
ZFP57 1 dataset
ChIP hESC GSE115387.ZFP57.hESC 201 bp overlap