chr4 : 34,464,319 34,464,718
399 bp 16 TFs 0 linked genes
This 399 bp open chromatin element has no linked target genes and is bound by 16 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:34,459,319 – 34,469,718
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 97 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 233 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 218 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 236 bp overlap
CRY2 1 dataset
ChIP U2OS_DMSO GSE130507.CRY2.U2OS_DMSO 283 bp overlap
CTCF 3 datasets
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 295 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 369 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 340 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 255 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 329 bp overlap
ChIP DE DE-FOXA2-2 326 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 381 bp overlap
ChIP DE DE-GATA4-2 399 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 186 bp overlap
ChIP DE DE-GATA6-2 399 bp overlap
MEF2D 3 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 223 bp overlap
ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 210 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 251 bp overlap
NEUROD1 5 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 232 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 166 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 185 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 131 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 214 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 219 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 243 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 239 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 279 bp overlap
USF1 1 dataset
ChIP Hep-G2 ENCSR000BGM.USF1.Hep-G2 110 bp overlap