chr4 : 25,370,350 25,370,927
577 bp 24 TFs 1 linked gene
This 577 bp open chromatin element is linked to ANAPC4 and is bound by 24 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ANAPC4 6.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:25,365,350 – 25,375,927
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
24 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 268 bp overlap
CTCF 1 dataset
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 328 bp overlap
EP300 1 dataset
ChIP hESC GSE17917.EP300.hESC 312 bp overlap
ESR1 6 datasets
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 316 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_4 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_4 193 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_6 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_6 305 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_F GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_F 194 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 577 bp overlap
ChIP primary-endometrium-cancer_E2_DSG GSE114737.ESR1.primary-endometrium-cancer_E2_DSG 269 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 194 bp overlap
FOXA2 8 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 267 bp overlap
ChIP BJ1-hTERT_Mimo GSE92491.FOXA2.BJ1-hTERT_Mimo 240 bp overlap
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 201 bp overlap
ChIP BJ1-hTERT_MimosinePlus GSE90454.FOXA2.BJ1-hTERT_MimosinePlus 240 bp overlap
ChIP DE DE-FOXA2-1 519 bp overlap
ChIP DE DE-FOXA2-2 483 bp overlap
ChIP KerCT GSE90454.FOXA2.KerCT 274 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 291 bp overlap
FOXP1 1 dataset
ChIP LNCaP GSE62492.FOXP1.LNCaP 133 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 357 bp overlap
ChIP DE DE-GATA4-2 457 bp overlap
ChIP foregut GSE117136.GATA4.foregut 261 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 375 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 327 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 385 bp overlap
ChIP DE DE-GATA6-2 542 bp overlap
ChIP foregut GSE117136.GATA6.foregut 352 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 358 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 258 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 232 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 219 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 193 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 141 bp overlap
HOXC6 1 dataset
ChIP 22Rv1 GSE129951.HOXC6.22Rv1 319 bp overlap
KLF4 1 dataset
ChIP HAP1 GSE130417.KLF4.HAP1 236 bp overlap
NANOG 4 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 373 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 408 bp overlap
ChIP hESC GSE18292.NANOG.hESC 192 bp overlap
ChIP hESC GSE20650.NANOG.hESC 186 bp overlap
NCAPH2 2 datasets
ChIP RMG-I GSE120058.NCAPH2.RMG-I 577 bp overlap
ChIP RMG-I_ARID1A-KO GSE120058.NCAPH2.RMG-I_ARID1A-KO 577 bp overlap
PDX1 1 dataset
ChIP hESC GSE58685.PDX1.hESC 183 bp overlap
POU5F1 4 datasets
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 128 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 317 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 504 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 264 bp overlap
PPARG 1 dataset
ChIP HUVEC-C_DMSO_HYPO GSE50144.PPARG.HUVEC-C_DMSO_HYPO 147 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 193 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 377 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 267 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 170 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 383 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 181 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 189 bp overlap