chr3 : 179,152,450 179,152,876
426 bp 14 TFs 2 linked genes
This 426 bp open chromatin element is linked to PIK3CA and PIK3CA-DT and is bound by 14 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
PIK3CA 4.1 kb Proximal Proximity
PIK3CA-DT 4.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:179,147,450 – 179,157,876
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
14 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 153 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 251 bp overlap
ChIP DE DE-FOXA2-1 408 bp overlap
ChIP DE DE-FOXA2-2 426 bp overlap
GATA1 2 datasets
ChIP K-562 GSE107726.GATA1.K-562 164 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 138 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 426 bp overlap
ChIP DE DE-GATA4-2 426 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 247 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 424 bp overlap
ChIP DE DE-GATA6-2 426 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 426 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 426 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 392 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 412 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 426 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 426 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 405 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 335 bp overlap
MEN1 1 dataset
ChIP PC-3 GSE132827.MEN1.PC-3 324 bp overlap
PGR 1 dataset
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 57 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 416 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 368 bp overlap
STAT3 1 dataset
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 76 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 263 bp overlap
TAL1 1 dataset
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 146 bp overlap
ZNF224 2 datasets
ChIP HEK293 GSE76494.ZNF224.HEK293 167 bp overlap
ChIP HEK293T GSE78099.ZNF224.HEK293T 110 bp overlap
ZNF664 2 datasets
ChIP HEK293 ENCFF343XSW 334 bp overlap
ChIP HEK293 ENCSR714LZQ.ZNF664.HEK293 304 bp overlap