chr3 : 167,684,842 – 167,685,118
276 bp 16 TFs 0 linked genes
This 276 bp open chromatin element has no linked target genes and is bound by 16 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:167,679,842 – 167,690,118
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
BHLHE22 1 dataset
Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap
CTCF 101 datasets
ChIP 22Rv1 ENCFF466OXN 65 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 66 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 122 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 108 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 243 bp overlap
ChIP ASC GSE21366.CTCF.ASC 106 bp overlap
ChIP B-cell ENCSR000AUV.CTCF.B-cell 243 bp overlap
ChIP BJ ENCSR000DQI.CTCF.BJ 174 bp overlap
ChIP C4-2B ENCFF821XVN 254 bp overlap
ChIP CD14 ENCSR000ATN.CTCF.CD14 276 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 106 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 182 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 201 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 120 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 276 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 55 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 202 bp overlap
ChIP GM12878 GSE76922.CTCF.GM12878 63 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 112 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 100 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 172 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 128 bp overlap
ChIP HFFc6 ENCFF005CJI 75 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 69 bp overlap
ChIP HeLa-Kyoto GSE102884.CTCF.HeLa-Kyoto 65 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 114 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 52 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 126 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 196 bp overlap
ChIP MCF-10AT1 GSE98551.CTCF.MCF-10AT1 80 bp overlap
ChIP MCF-7 ENCFF210JUZ 155 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 193 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 221 bp overlap
ChIP NPC GSE115407.CTCF.NPC 244 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 276 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 153 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 164 bp overlap
ChIP Panc1 ENCFF056JQX 183 bp overlap
ChIP RWPE-1 ENCSR303GFI.CTCF.RWPE-1 59 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 120 bp overlap
ChIP RWPE1 ENCFF200GQF 266 bp overlap
ChIP RWPE2 ENCFF911IEE 227 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 276 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 79 bp overlap
ChIP SU-DHL-6 ENCSR125DKL.CTCF.SU-DHL-6 276 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 65 bp overlap
ChIP T-47D_NaCl-1h GSE111923.CTCF.T-47D_NaCl-1h 162 bp overlap
ChIP T-47D_NaCl-30min GSE111923.CTCF.T-47D_NaCl-30min 184 bp overlap
ChIP T-47D_NaCl-7-5min GSE111923.CTCF.T-47D_NaCl-7-5min 276 bp overlap
ChIP T-cell GSE115893.CTCF.T-cell 276 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 54 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 65 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-4h 75 bp overlap
ChIP VCaP ENCFF858YQT 76 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 149 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 274 bp overlap
ChIP brain ENCFF163BBN 73 bp overlap
ChIP chondrocyte ENCFF134ORZ 91 bp overlap
ChIP colon_transverse ENCSR236YGF.CTCF.colon_transverse 163 bp overlap
ChIP colonic mucosa ENCFF319RUN 181 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF041CKA 176 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF149PUN 194 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF230SFD 210 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF311KBD 164 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF896AZK 160 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF974AQC 203 bp overlap
ChIP endothelial cell ENCFF663LIE 256 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 128 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 165 bp overlap
ChIP fetal_erythroblasts GSE102184.CTCF.fetal_erythroblasts 122 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 179 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 248 bp overlap
ChIP hESC_D7 GSE116862.CTCF.hESC_D7 270 bp overlap
ChIP heart left ventricle ENCFF575JEQ 209 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 191 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 276 bp overlap
ChIP left lung ENCFF696EWL 145 bp overlap
ChIP lymphoblast GSE155324.CTCF.lymphoblast 100 bp overlap
ChIP lymphoblast_mut GSE155324.CTCF.lymphoblast_mut 194 bp overlap
ChIP lymphocyte_blood GSE46832.CTCF.lymphocyte_blood 157 bp overlap
ChIP mesothelial cell of epicardium ENCFF427RFE 230 bp overlap
ChIP natural killer cell ENCFF517SNI 276 bp overlap
ChIP nephron ENCFF972IQB 180 bp overlap
ChIP nerve_tibial ENCSR434XLP.CTCF.nerve_tibial 176 bp overlap
ChIP neutrophil ENCSR785YRL.CTCF.neutrophil 262 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 220 bp overlap
ChIP pancreas_body ENCSR572DUJ.CTCF.pancreas_body 54 bp overlap
ChIP peripheral-blood-neutrophil_PMA-1 GSE126755.CTCF.peripheral-blood-neutrophil_PMA-1 180 bp overlap
ChIP peripheral-blood-neutrophil_US-1 GSE126755.CTCF.peripheral-blood-neutrophil_US-1 183 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 276 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 276 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 274 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 134 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 276 bp overlap
ChIP spleen ENCFF121QGK 211 bp overlap
ChIP spleen ENCFF520HPZ 204 bp overlap
ChIP spleen ENCFF825QXK 204 bp overlap
ChIP spleen ENCSR225YGX.CTCF.spleen 171 bp overlap
ChIP spleen ENCSR343RJH.CTCF.spleen 163 bp overlap
ChIP spleen ENCSR601FEB.CTCF.spleen 169 bp overlap
ChIP tibial nerve ENCFF665IWH 195 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 106 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 137 bp overlap
MYOG 1 dataset
Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap
NHLH1 1 dataset
Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap
Neurod2 1 dataset
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
POLR2H 1 dataset
ChIP K562 ENCFF377NHG 236 bp overlap
RAD21 1 dataset
ChIP HCT-116 GSE121355.RAD21.HCT-116 87 bp overlap
SMC1A 1 dataset
ChIP HCT-116 GSE112000.SMC1A.HCT-116 182 bp overlap
SMC3 2 datasets
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 85 bp overlap
ChIP neural ENCSR404BPV.SMC3.neural 60 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
ZNF136 1 dataset
ChIP HEK293T GSE78099.ZNF136.HEK293T 153 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
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