chr3 : 150,975,707 150,975,900
193 bp 15 TFs 1 linked gene
This 193 bp open chromatin element is linked to CLRN1 and is bound by 15 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
CLRN1 3.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:150,970,707 – 150,980,900
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
15 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 156 bp overlap
EZH2 1 dataset
ChIP DND41 ENCSR000ASW.EZH2.DND41 190 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 193 bp overlap
GATA2 1 dataset
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 181 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 193 bp overlap
ChIP DE DE-GATA4-2 193 bp overlap
ChIP foregut GSE117136.GATA4.foregut 193 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 193 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 193 bp overlap
GATA6 11 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 104 bp overlap
ChIP DE DE-GATA6-1 193 bp overlap
ChIP DE DE-GATA6-2 193 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 193 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 193 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 193 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 193 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 193 bp overlap
ChIP foregut GSE117136.GATA6.foregut 193 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 193 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 193 bp overlap
L3MBTL2 2 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 152 bp overlap
ChIP K562 ENCFF320EQC 193 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 120 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 178 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 153 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 148 bp overlap
USF2 1 dataset
ChIP WTC11 ENCFF139JAW 108 bp overlap
ZNF584 1 dataset
ChIP K562 ENCFF771INO 193 bp overlap