chr1 : 62,348,494 62,348,989
495 bp 16 TFs 0 linked genes
This 495 bp open chromatin element has no linked target genes and is bound by 16 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:62,343,494 – 62,353,989
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
EHF 1 dataset
ChIP primary-bronchial-epithelial GSE85401.EHF.primary-bronchial-epithelial 139 bp overlap
ERG 1 dataset
ChIP VCaP_shERG GSE110655.ERG.VCaP_shERG 143 bp overlap
ETS1 1 dataset
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 219 bp overlap
FLI1 1 dataset
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 52 bp overlap
FOXA1 1 dataset
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 68 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 285 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 333 bp overlap
ChIP DE DE-GATA4-2 407 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 305 bp overlap
ChIP DE DE-GATA6-2 454 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 384 bp overlap
HNF4A 3 datasets
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 157 bp overlap
ChIP KATO-III GSE114018.HNF4A.KATO-III 162 bp overlap
ChIP liver ERP002306.HNF4A.liver 168 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 138 bp overlap
RNF2 1 dataset
ChIP HMELBRAF_OVER GSE51929.RNF2.HMELBRAF_OVER 104 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 341 bp overlap
SMARCA4 1 dataset
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 250 bp overlap
SPI1 1 dataset
ChIP K-562 ENCSR000BGW.SPI1.K-562 114 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 231 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 246 bp overlap