chr3 : 112,564,307 112,565,127
820 bp 17 TFs 2 linked genes
This 820 bp open chromatin element is linked to SLC35A5 and ATG3 and is bound by 17 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
SLC35A5 2.2 kb Proximal Proximity
ATG3 2.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:112,559,307 – 112,570,127
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
17 transcription factors
Source
Cell type
CREB1 1 dataset
ChIP GM23338 ENCFF432ZEW 305 bp overlap
CTCF 19 datasets
ChIP GM23338 ENCFF531QOI 205 bp overlap
ChIP GM23338 ENCFF772DML 87 bp overlap
ChIP H1 ENCFF764RHO 277 bp overlap
ChIP H9 ENCFF152GTF 265 bp overlap
ChIP bronchial epithelial cell ENCFF500SEA 271 bp overlap
ChIP endodermal cell ENCFF471YCZ 243 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 651 bp overlap
ChIP esophagus squamous epithelium ENCFF037IYT 397 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 105 bp overlap
ChIP hepatocyte ENCFF263BLJ 345 bp overlap
ChIP lower lobe of left lung ENCFF906NCV 461 bp overlap
ChIP neural progenitor cell ENCFF420RBO 221 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 437 bp overlap
ChIP thyroid gland ENCFF204HWS 371 bp overlap
ChIP thyroid gland ENCFF300RYK 445 bp overlap
ChIP thyroid gland ENCFF631QRY 184 bp overlap
ChIP thyroid gland ENCFF748ICQ 311 bp overlap
ChIP upper lobe of left lung ENCFF277NLT 431 bp overlap
ChIP upper lobe of left lung ENCFF962AIJ 425 bp overlap
ETV6 2 datasets
ChIP WTC11 ENCFF812SCD 437 bp overlap
ChIP WTC11 ENCFF812SCD 383 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 125 bp overlap
ChIP DE DE-FOXA2-1 471 bp overlap
ChIP DE DE-FOXA2-2 453 bp overlap
GATA1 3 datasets
Motif DE_12h DE_12h-GATA1_MA0035.5 7 bp overlap
Motif DE_60h DE_60h-GATA1_MA0035.5 7 bp overlap
Motif ES_0h ES_0h-GATA1_MA0035.5 7 bp overlap
GATA1::TAL1 3 datasets
Motif DE_12h DE_12h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap
Motif ES_0h ES_0h-GATA1TAL1_MA0140.3 17 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 322 bp overlap
ChIP DE DE-GATA4-2 333 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 408 bp overlap
ChIP DE DE-GATA6-2 285 bp overlap
HOXC13 1 dataset
Motif ES_0h ES_0h-HOXC13_MA0907.2 9 bp overlap
JDP2 1 dataset
Motif ES_0h ES_0h-JDP2_MA0655.1 9 bp overlap
NANOG 3 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 347 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 241 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
NFATC3 3 datasets
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
Motif DE_60h DE_60h-NFATC3_MA0625.3 6 bp overlap
Motif ES_0h ES_0h-NFATC3_MA0625.3 6 bp overlap
Nfatc1 3 datasets
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
Motif DE_60h DE_60h-Nfatc1_MA0624.3 6 bp overlap
Motif ES_0h ES_0h-Nfatc1_MA0624.3 6 bp overlap
POLR2A 1 dataset
ChIP Peyer's patch ENCFF990IYL 221 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 299 bp overlap
ZNF184 2 datasets
Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap
Motif DE_60h DE_60h-ZNF184_MA2120.1 13 bp overlap
ZNF549 1 dataset
Motif ES_0h ES_0h-ZNF549_MA1728.2 8 bp overlap